Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3 282 2e-71 >seq3 Length=2066014 Score = 282 bits (312), Expect = 2e-71 Identities = 454/649 (70%), Gaps = 5/649 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| | ||||| |||||||| |||| |||||| | | |||||||||||| || Sbjct 1414577 ATTTGGAGAAAATAATGGCCAATCAAGGTTTTTTTCAACTCTTTTCATAAATAAATCCGG 1414636 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||| | ||| |||||||||||| ||||| || |||||||| || ||||| ||| | Sbjct 1414637 GATCCAAAGAGCAGGAAATAAATCTCTTGCTCTAATCTCTTCTTTACCATGATTTTTTCT 1414696 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | ||||||||||| || | ||||||||||| | |||||| ||||| ||| Sbjct 1414697 AATATCAATAAAATCAAAAATGTCAGCATGCCATGGTTCAAGATAGATTGCAAAGGCACC 1414756 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| ||||||||||| || ||||||||||| |||||| ||| | ||||| Sbjct 1414757 AGGACGTTTATTACCACCTTGATCAACATATCTTGCAGTCATATTGAATACTCTTAACAT 1414816 Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 ||| | |||| ||| | ||| || || || | ||| | || || || | ||| | Sbjct 1414817 TGGGA-TAATACCATTGGAAGTACCATTAGTACCTGCAATATATGAACCGGTTGCTCTGA 1414875 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAA 26246 ||| ||| ||| | ||| || |||||||| |||||||||| | || || || | Sbjct 1414876 TATTATGAATATGTAAACCTATACCACCAGCATGTTTTGAAATAACGGCCATTTCAGACA 1414935 Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306 |||||||| || || ||||| |||| | |||||| | | | |||||||||||| | Sbjct 1414936 AAGTATCGAATATACCATTTATTGAATCATCCTTCATTGCAACAAGAAAACAAGAAGACA 1414995 Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366 ||||| | | ||||| | ||| |||||||| || | ||||||||| ||||| | Sbjct 1414996 TTTGCGGCTTTGGAGTTCCAGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATTTTA 1415055 Query 26367 CACTCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAG 26426 | || |||||||||||||||| |||||||| | | | || ||| | Sbjct 1415056 GAGACATTAAATTATAAGTTTCAAGAACACGCTCGATATTATCACCATGAATACCAACCG 1415115 Query 26427 CTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCA 26486 | ||| | || || |||||||| ||| || ||| | | ||| | | Sbjct 1415116 CAACTCTCATAATCAAATGTTGAGGTCTTTCGGCCACTTTA---CCATTAATTCTTAATA 1415172 Query 26487 AATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATC 26535 |||||||| |||| | |||||| || |||||| ||| || |||||||| Sbjct 1415173 AATAAGATCTTTCAAGAGTTTTAAAGCCAAAAAAATTATAGTTGAAATC 1415221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039781041325