Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 140 4e-28 >seq2 Length=2503681 Score = 140 bits (154), Expect = 4e-28 Identities = 317/467 (68%), Gaps = 26/467 (6%) Strand=Plus/Minus Query 138234 GTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCT 138293 || ||||||||||||| |||||| ||||| || ||| ||||| || | || ||| Sbjct 225779 GTTTTATGTAAATTTAAATGACAAACATCAGCTCCAAGGTCACCAGGAGAAGTTAAACCA 225720 Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAAC--GA 138351 | ||| ||||| | ||||||||| || ||||| ||||| || ||||| |||||| | Sbjct 225719 ATCTGAGCATTCATATTTGCACCGTCAAGATAAACCTGGCCTCCATTTAAATGAACCAAA 225660 Query 138352 TCTTACATATCTG-TCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 ||| || ||| ||| || |||| |||||||| ||||| || |||||||| || ||| Sbjct 225659 TCT---ATTGCTGATCTAATTTTTGGTTCAAATAAACCATAGGTTGATGGATACGTGATC 225603 Query 138411 ATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGAT-GTC 138469 || || || | | |||| | | | ||| ||||| || || | || || ||| Sbjct 225602 ATTAT---TGCGGCT--AAATTTTTAGAATATT--TTTCTGCTTTAAGTTTTAAATCGTC 225550 Query 138470 TATGTT------GCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGAC 138523 | ||| ||||| ||| || ||||| |||||||| | || ||||| | Sbjct 225549 AAGGTTTAAGGAACCATCTTCAAGGCATTTGACCGGAACAACTTTTAAGCCAGCCATTGC 225490 Query 138524 TGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCT---TTT 138580 ||||| || ||||| ||||| ||||| || | ||||| ||||| | |||||| | Sbjct 225489 AGCACTTGCTGGATTTGTTCCGTGTGCAGAAACAGGTATTAGACAAATATTTCTATCTGA 225430 Query 138581 ATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTG 138640 ||| || ||| | ||| || | ||| ||| || | |||| ||| ||||| || Sbjct 225429 TTCACCTTTTGACTCAAGAT-ATTTTCTT--ATTACTCGTAAGCCTGTATATTCACCTTG 225373 Query 138641 TGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATAT 138687 | ||| | ||| || || | | || |||||| || ||||||| Sbjct 225372 AGCTCCAGAGTTTGGCATAAAAGTAACAGCATCAAAGCCAGTGATAT 225326 Score = 118 bits (130), Expect = 1e-21 Identities = 239/349 (68%), Gaps = 13/349 (4%) Strand=Plus/Minus Query 139782 ACTGCTAGAGTTTGTGGGAATATATCTTGATCAACTATTACAGTCTTCTTATCTCTTGTA 139841 || |||| |||||||||||| |||| || |||||| || ||| || || | | | | Sbjct 224195 ACAGCTAAAGTTTGTGGGAAAATATTTTTATCAACAATATAAGTATTTTTTTTTTGTTTT 224136 Query 139842 GAATTAT---ATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGAT 139898 |||| || | | ||| |||||| || || || || || |||||||||||| ||| Sbjct 224135 GAATAATGAAAAGTTAATGTCATTGCTTCAGCAGCAGCGGTACCTTCATCTAATAAAGAA 224076 Query 139899 GCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCT 139958 || ||||| | ||||| || || | || | || | ||||| |||| || | || | Sbjct 224075 GCATTTGCAACAGGTAAACCAGTTAAATCAGAAATTACAGTTTGAAAATTTAAGAGAGAT 224016 Query 139959 TCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAG-- 140016 || ||||| || ||||| || ||||||||||| || || |||| || ||||| | Sbjct 224015 TCTAATCTACCTTGAGAAATTTCAGCTTGATATGGCGTATAAGGAGTATACCATTCGGGA 223956 Query 140017 GATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGAC 140076 |||||| || || |||| || ||||| || ||||| || ||| || |||| || Sbjct 223955 GATTCT-AATAA-ATTTCTTAAAATTACTGGAGGGGTAATAGTATTATAATAACCTTTAC 223898 Query 140077 CTATAAGACTAGGTTTT---ACTTTGTTTGCTTTTGCTATATTTTTTAA 140122 | || | || |||| | ||| || ||||| || |||||||| Sbjct 223897 CAATTA---AAGATTTTAAAATTTTATTCTTTTTTGATAATTTTTTTAA 223852 Score = 100 bits (110), Expect = 3e-16 Identities = 187/272 (69%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||||||||| | ||||| | ||| |||||| || | | ||||| || ||||| || Sbjct 224715 ACCATGATAAACAGCATAAGAAGCAGCCATATTAGCTAATAAAGCTTGAGCAGTGCATAT 224656 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| |||||||| |||||| ||||||| || ||||| ||||||| || | | | Sbjct 224655 ATTAGAAGTTGCTTTTTCTCTTTTAATATGTTGTTCTCTTGTTTGTAAAGCAAGACGTAA 224596 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCT-CT 139449 |||||||| || || || ||| || || | ||| || || || || | || Sbjct 224595 AGCAGGATTACCCAATCTATCTTTTGATAAGCCAACTAATCTACCCGGCATTTTACGACT 224536 Query 139450 TATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATAC 139509 || | || | | | || || || |||||||||||||| || || ||||| |||| | Sbjct 224535 TAAATTTTTTT-TAACAGCGAAAAAAGCAGCATGAGGACCACCATAACCCATTGGAACTC 224477 Query 139510 CAAACCTTTGCATACTACCTACAGCAATATCA 139541 | || ||||| | ||||| ||| |||||| Sbjct 224476 CGAATCTTTGAGAAGAACCTAAAGCTATATCA 224445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997886138920