Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq4 215 9e-51 seq10 214 3e-50 seq1 187 4e-42 seq8 178 2e-39 seq2 102 1e-16 seq29 91.5 3e-13 >seq4 Length=1551466 Score = 215 bits (238), Expect = 9e-51 Identities = 185/229 (81%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 |||| ||||| |||| ||| || | ||| | ||||| |||||| ||||||||| || | Sbjct 1333099 TACCGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAG 1333158 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 |||| |||||| ||| ||||||||||||||||||||||| || | ||||||||||||| Sbjct 1333159 ATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAG 1333218 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | || |||||||||||||| || |||| || | ||| ||||||||| || || |||| Sbjct 1333219 GAATACCTTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAA 1333278 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| ||| || ||||||||||| | ||||| ||||| |||||||| Sbjct 1333279 CTTCTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 194 bits (214), Expect = 3e-44 Identities = 185/237 (78%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| |||| | || | ||| | || | ||||| |||||| Sbjct 1333319 AATTTGCATACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATT 1333378 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || ||||| |||||| ||| ||||||||||||||||||||||| || | ||||| Sbjct 1333379 ATAATCAGATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTG 1333438 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || ||||||||||||||||| ||||| | ||| | ||| ||||||||| || Sbjct 1333439 ATCTGGTGGAATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGA 1333498 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| | || || |||||||| |||| ||||| ||||| |||||||| Sbjct 1333499 TGATTCAACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 187 bits (206), Expect = 4e-42 Identities = 183/236 (78%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||||||||| |||| ||| || | ||| | || | ||||| ||||||| Sbjct 1333548 ATTTGCATACCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTA 1333607 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || |||||| || ||||||||||| || ||||||||||| | ||||| Sbjct 1333608 TAGTCAGACAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGG 1333667 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||||||||| ||||| |||| | ||| ||||||||| ||| Sbjct 1333668 TCTGGAGGAATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAA 1333727 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||||| ||| || || ||||| |||| || || ||||| |||||||| Sbjct 1333728 GATTCTACTTCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 167 bits (184), Expect = 4e-36 Identities = 181/240 (75%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| | || | || | ||| | || | ||||| ||| || Sbjct 1333775 AATTTGCATACCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTT 1333834 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| ||||| |||||| ||| |||||||| || ||||| || ||||| | ||||| Sbjct 1333835 GTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTG 1333894 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || ||||||||||||||||| || || | ||| | ||| ||| ||||| || Sbjct 1333895 ATCTGGTGGAATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGA 1333954 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || |||||||||| ||| || |||||||| |||| || || || || ||||||||||| Sbjct 1333955 TGATTCAACTTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 1334014 >seq10 Length=718177 Score = 214 bits (236), Expect = 3e-50 Identities = 186/231 (81%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| |||| | || | ||| || || | ||||| ||||||||| || || Sbjct 467985 ACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGA 468044 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 ||| |||||| ||| ||||||||||| || |||||||||||||| |||||||| || || Sbjct 468045 TAATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGG 468104 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||||||||| ||||| |||| | ||| ||||||||| ||||| ||||| Sbjct 468105 AATACCTTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAAC 468164 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||| || ||||||||||||| ||||| ||||| ||||||||||| Sbjct 468165 TTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTT 468215 >seq1 Length=2713227 Score = 187 bits (206), Expect = 4e-42 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| |||| | || | ||| || || | ||||| ||| ||||| || Sbjct 1439208 ATACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCA 1439267 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| ||||| ||| ||||||||||| || ||||| |||||||| |||||||| || Sbjct 1439268 GATAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGT 1439327 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| ||||||| ||| | ||| ||| ||||| ||||| || Sbjct 1439328 GGGATACCTTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCC 1439387 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||||||| ||| |||||||||||||| || ||||| ||||| Sbjct 1439388 ACTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428 >seq8 Length=720923 Score = 178 bits (196), Expect = 2e-39 Identities = 181/235 (77%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 |||| ||||| |||| ||| || | ||| | || | ||||| ||||||||| || | Sbjct 254688 TACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAG 254747 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 |||| ||||| ||| ||||||||||| || |||||||| || | |||||||| || | Sbjct 254748 ATAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTG 254807 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | || ||||||||||||| ||||| |||| | || ||||||||| || || |||| Sbjct 254808 GAATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAA 254867 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATT 193366 |||||| ||| ||||||||||| |||| ||||| ||||| ||||| ||| |||| Sbjct 254868 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG-ATTATATT 254921 >seq2 Length=2503681 Score = 102 bits (112), Expect = 1e-16 Identities = 327/514 (64%), Gaps = 42/514 (8%) Strand=Plus/Plus Query 159708 AAACGAGGATCATTAATTGTAATTGAAGGTTTAGATAAAACAGGAAAAACAACGCAATGT 159767 ||| |||| | |||||| | ||||| || | |||| ||| || ||||| || ||| | Sbjct 906960 AAAAGAGGTTTGTTAATTTTGATTGAGGGACTTGATAGAACTGGGAAAACTACTCAAATT 907019 Query 159768 AATTATTTAATAGATAATTTAATTAAAAATGANNNNNNNNNNNA-----ATATA-TGAAA 159821 |||| |||| |||| |||| ||||||||| | | ||| | ||| Sbjct 907020 AATTTATTAAAAGATTATTT---TAAAAATGAATTGAAAAAAGATGTAGAAATAATTAAA 907076 Query 159822 TTTCCAGATAGAAATACAGAAATTGGTATNNNNNNNNNNNNNNNNNTA------AAATCA 159875 ||||||||||||| ||| |||||||| || ||| | Sbjct 907077 TTTCCAGATAGAACTACTCCAATTGGTAAATTGATAAATAATTATTTATCTTCTAAAGAA 907136 Query 159876 AATa------aaaaaaTATCCGATGAAGTAATTCATCTATTATTTTCTGCAAATAGATGG 159929 ||| | | | |||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct 907137 GATAGTGAAGATACATTATCTGATGAATCAATTCATTTATTATTTTCTGCAAATCGATGG 907196 Query 159930 GAA---AAATATAATGAAATAATTAAAACGTTAGAAATGGGTATTACTATAATTATGGAT 159986 ||| ||| | | |||| || || | ||| | | || || | ||| | | ||| Sbjct 907197 GAATTGAAAGAAA---AAATTATGAATAAATTAAATAATGGAATAAATATTTTATTAGAT 907253 Query 159987 AGATATTGCTATTCCGGAGTAGCTTATTCAGCATCTAAAGGTATTGATATAAATTGGTGC 160046 |||||| ||||| || || |||||||| || |||||| | ||| | |||||||| Sbjct 907254 AGATATATTTATTCAGGTATAATTTATTCAGTCTCAAAAGGTTTAGATTTTAATTGGTGT 907313 Query 160047 AAATATTCTGATATTGGATTACCTAAACCGGA-TAAAGTTATATT------TTtatatat 160099 || |||||| || ||||| ||||| || | | || | || |||| | || Sbjct 907314 TTTAATCCTGATAAAGGTTTACCAAAACCAGATTTTACTTTTTTTTTAACATTTAAAAAT 907373 Query 160100 ggatatt--------gaaaaaatcgcatatagaaataattatggagatgaaatatatgaa 160151 | ||| ||||| | || | |||||||||| ||| || || | ||||||| Sbjct 907374 AAAAATTATATAAAAGAAAATTTATCAAAAAGAAATAATTTTGGTGAAGAGAAATATGAA 907433 Query 160152 aaaatagaatttcagaaaaaaGTATATGATTTAT 160185 || ||||||| |||||| | | | |||| Sbjct 907434 GTTTTACAATTTCAATTAAAAGTTTTTAAATTAT 907467 >seq29 Length=110012 Score = 91.5 bits (100), Expect = 3e-13 Identities = 230/343 (67%), Gaps = 9/343 (3%) Strand=Plus/Plus Query 22518 GGATTTCATGTGCATGAATATGGCGATTTGAGCAACGGATGTACATCAGCTGGAGAGCAT 22577 || |||||| | ||| ||| ||| ||| | || || ||||| || ||||| ||| Sbjct 46121 GGTTTTCATATTCATCAATTTGGTGATAATACAAATGGTTGTACTTCTGCTGGTCCACAT 46180 Query 22578 TTTAATCCATTTAATAAAAATCACGGAAATATTACGGATTACGAAAGGCATTTAGGGGAT 22637 |||||||| |||||||||| ||| || | | ||| | || ||| | || ||| Sbjct 46181 TTTAATCCTTTTAATAAAACTCATGGTTCTCCAATTGATGAAATTAGACATGTTGGAGAT 46240 Query 22638 TTGGGAAATATAAACGCAATCATACATAAAGGTAGAACATACATAGATATTAAA-GATAA 22696 || || ||||| || | | || || || ||| | || | | | |||||| ||||| Sbjct 46241 TTAGGTAATATTAA--AACTGATTCA-AATGGTTTAGCA-AAAGGTAAATTAAATGATAA 46296 Query 22697 TTTAATGTCTTTATATGGCCCATATAATATTTTAGGAAGAAGTTTAGTAGTTCACAATGA 22756 |||||| |||| ||| |||||| ||| | || |||| | | ||| |||| ||| Sbjct 46297 TTTAATTAAATTATTTGGTCCATATTCTATAATTGGTAGAACTGTTGTAATTCATGATGG 46356 Query 22757 TCCAGATGATTTAGGAAGATCTACTCATCC--TTTGAGTAAAATATCGGGAAATTCAGGA 22814 | |||||||||||| | | | |||||| || |||| | | || ||| | || Sbjct 46357 TGAAGATGATTTAGGTAAAGGTGGTCATCCAGATTCTTTAAA--AACTGGTAATGCTGGT 46414 Query 22815 GGAAGATTAGCTTGTGGAATAATAGGCGTATCAAACTATTAAT 22857 || ||| |||||||| |||| || |||| || || |||| Sbjct 46415 GGTAGACCTGCTTGTGGTGTAATTGGTTTATCCAATTAATAAT 46457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653601556720