Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq15 468 7e-127 seq10 217 2e-51 seq8 194 2e-44 seq4 190 3e-43 seq1 165 1e-35 >seq15 Length=386167 Score = 468 bits (518), Expect = 7e-127 Identities = 681/950 (72%), Gaps = 25/950 (3%) Strand=Plus/Minus Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919 |||||||| || || ||| |||| || || ||||| || || || | || || || Sbjct 129426 AGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAAAGAAAT 129367 Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTA 17979 | |||||||||||||||||| || |||||| |||||| | ||| | Sbjct 129366 ATTTTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATTACCTAAAGCAAC 129307 Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039 ||||||||||||||| |||||||| |||||||| |||| || | ||||||||||||| Sbjct 129306 TAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCTAA 129247 Query 18040 TAGTCTGAA--AGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTT 18097 || ||| ||||| ||||||| ||| | | ||||| || || ||||||| || | Sbjct 129246 TAAA--GAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTCAGTA 129189 Query 18098 ATTATGTTTATTACCCTAGAT---TTTGGCAATTTATTAATTATGTGATTATAATATAAT 18154 || || ||| || | || ||||| ||||||||||| ||| || ||||| Sbjct 129188 ATAATTTTTTGAACAATTAATGGATTTGG---TTTATTAATTAAATGAG---AAAATAAT 129135 Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 ||||| ||||||||||| || | |||||||||||| | |||||||| || ||| ||| Sbjct 129134 AAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGTT 129075 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || || ||||||| |||||||||||||| ||||||||| || || ||| | ||| ||| Sbjct 129074 AAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAAG 129015 Query 18275 AATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCA-AAACTGTATTTATTGC 18332 || ||||| ||||| ||| || || || | ||||||||||||| | | | | | ||| Sbjct 129014 AAAATACCTTCAACAGCA-GCAAAAGCAACTAATCTTTCAGCATATAAAGCA-TCATT-A 128958 Query 18333 TCAGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATA 18391 ||| | |||||| || |||||||| ||| ||||| || || | || || Sbjct 128957 TCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATT 128898 Query 18392 GCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451 |||||||| ||| | |||||||| | |||||| |||||||| || | ||| |||||| Sbjct 128897 GCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAA 128838 Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511 || |||||||||| || ||||||| || ||||||| |||||| || |||| || Sbjct 128837 TAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCA 128778 Query 18512 GGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCA 18571 ||| ||||| || | |||| |||| || ||||| |||||||| ||||| |||| | Sbjct 128777 GGAATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAA 128718 Query 18572 GATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTG 18628 | ||| |||||||| ||||| | ||| ||| | ||||||| | || | |||| Sbjct 128717 GCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATTA 128658 Query 18629 TTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCG 18688 ||||| |||| || |||||| || ||||| |||||| | |||||||| || | ||| Sbjct 128657 TTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCA 128598 Query 18689 GCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAATAATATATATCGTTTA 18748 || | ||| ||||||| |||| || | || || || |||||||| | | | || Sbjct 128597 GCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAAACGACGT 128538 Query 18749 TAATTTTTTATTAACATAGGTTCTTCCATTTTTCTAATATTATTAATTTT 18798 | ||||| ||||| | |||||||| ||||| ||| | |||||||| Sbjct 128537 TTATTTTCCATTAATAAAGGTTCTT--GATTTTCACATAAT-TTAATTTT 128491 >seq10 Length=718177 Score = 217 bits (240), Expect = 2e-51 Identities = 205/258 (79%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 155800 ATAATAAAAATTTATGTAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTA 155859 ||||| |||||| || ||| |||||||||| ||| ||||||| || || || ||||| | Sbjct 468232 ATAATCAAAATT-ATTTAA--AAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAA 468176 Query 155860 TTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATA 155919 |||| |||||||| ||| |||||||| |||| || || |||| |||||| ||||||| Sbjct 468175 TTACTTTAGAAGTTGAATCTTCTGATACTATTGATAATGTTAAAAGTAAAATTCAAGATA 468116 Query 155920 AAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATA 155979 ||||||| || || ||||| ||||||||||| |||| ||| ||||| || | |||||| Sbjct 468115 AAGAAGGTATTCCACCAGATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATG 468056 Query 155980 CCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGAT 156039 ||||| ||||| ||||||||||| ||||| | || | |||||||| ||||||| Sbjct 468055 GTAGAACATTATCTGATTATAATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGAT 467996 Query 156040 TAAGAGGCGGT-GTAAAA 156056 ||||||| ||| |||||| Sbjct 467995 TAAGAGGTGGTGGTAAAA 467978 >seq8 Length=720923 Score = 194 bits (214), Expect = 2e-44 Identities = 184/234 (79%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 155817 AATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAA 155876 |||| ||| ||||| ||| | ||||| || ||||| ||||||||||| |||||||| ||| Sbjct 254921 AATATAAT-CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAA 254863 Query 155877 GATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCA 155936 ||||||| |||| ||||| |||| |||||| ||||||||||||| || || ||| Sbjct 254862 TCCTCTGATACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCA 254803 Query 155937 GAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGAT 155996 || |||||| | ||||||| ||| ||||| || | |||||| ||||| ||||| ||| Sbjct 254802 GATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGAT 254743 Query 155997 TATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 |||||||| ||||| | || ||||||||||| | ||||||||||| ||| Sbjct 254742 TATAATATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGGT 254689 >seq4 Length=1551466 Score = 190 bits (210), Expect = 3e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| ||||| || ||||| ||| ||| Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || ||| ||||| |||||||||||||| || || ||||| ||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| |||||| || || | |||||| ||||| ||||| ||||||||| Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || ||||||||||| |||||||||||||| ||| Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGGT 1333328 Score = 187 bits (206), Expect = 4e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| ||||| || ||||| ||||| |||||||| ||| ||| Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || || || || |||||||||||||| || ||||| || ||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| |||||| || || | |||||| ||||| ||||| ||||||||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| | || ||||||||||| | ||||||||||||||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGGT 1333100 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || || ||||| || || || || |||||||| ||| ||| Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || |||| |||||| |||||||||||||| || |||||||| ||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | || |||| ||| ||||| || | ||||| |||||||| || || |||||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || ||||||||||| | ||||||||||| ||| Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGTGGT 1333556 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||| || | || || || ||||| ||||| ||||| |||||||| ||| Sbjct 1334014 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCA 1333955 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||||| ||| || || ||| || || |||||||||||||| || || ||||| Sbjct 1333954 TCTGATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACCAGAT 1333895 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||| | || || | ||||||||||| | |||||| ||||||||||| || || Sbjct 1333894 CAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1333835 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||||| | || ||||||||||| |||||| | ||||| ||| Sbjct 1333834 AACATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAGACTTAGAGGTGGT 1333784 >seq1 Length=2713227 Score = 165 bits (182), Expect = 1e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| ||||||| | || || |||||||| || |||||||| ||| |||||||| ||| Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 || || ||| ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct 1439368 GATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTA 1439309 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | ||| ||||| || | |||||| ||||||||||| |||||||| || ||| Sbjct 1439308 ATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAA 1439249 Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | |||||||| |||||||||||||| ||| Sbjct 1439248 GAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGGT 1439210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871350463600