Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq15 399 4e-106 seq10 241 3e-58 seq1 215 1e-50 seq4 199 8e-46 seq8 190 4e-43 seq29 127 4e-24 >seq15 Length=386167 Score = 399 bits (442), Expect = 4e-106 Identities = 625/888 (70%), Gaps = 28/888 (3%) Strand=Plus/Minus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAATA 49650 ||||||||||||||||||| | ||||||| |||||| | || | | | || ||||| Sbjct 129360 CATAAAATCAAATGGATTTGTAACATTATAAAATTTTT-TATTACCTAAAGCAACTAATA 129302 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 ||||||| || ||||||||||||||||| ||||||||| |||||||||||| ||||| Sbjct 129301 ATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCTAATAAAG 129242 Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770 | ||||| |||||| || | | |||||||| || || ||||||| |||| || Sbjct 129241 AAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTCAGTAATAATTT 129182 Query 49771 taattatattattttttgataa--tttat-atttaatatgattcgcatatattaaACATG 49827 | || | ||| | ||| ||||| | |||| |||| | | ||| |||||| | Sbjct 129181 T--TTGAACAATTAATGGATTTGGTTTATTAATTAA-ATGA---GAAAATAATAAACAAG 129128 Query 49828 CAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 49887 ||||||||||||| | ||| || || ||| | || |||||||| ||| ||||| |||| Sbjct 129127 CAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGTTAAACCTG 129068 Query 49888 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 49947 ||||||| ||||| ||||| | |||||||||||| |||||| | ||| ||||| |||| Sbjct 129067 GCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAAGAAAATAC 129008 Query 49948 CCTCGACACACGCAAATGCTATTATTCTTGCTCC-----AAACATTAATTTATCATCTAA 50002 | || ||| ||||| || | || |||| | | || ||| | ||||||| || Sbjct 129007 CTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCA--TTATCAT-TA- 128952 Query 50003 TATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 50062 ||||| ||| |||||| || ||||||| ||| ||| | || || |||| || || || Sbjct 128951 -ATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATTGCATT 128893 Query 50063 AAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACAT 50122 |||||| || ||||| | | |||||||||||| | Sbjct 128892 AAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAATAAGT 128833 Query 50123 TTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATA 50182 ||||||||| | | |||||| |||||||| |||||| | | ||||| | | Sbjct 128832 TTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCAGGAAT 128773 Query 50183 CTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGC 50242 |||||||| | | | || |||||||||||| ||| |||||||||||||| ||||| Sbjct 128772 TTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAAGCTGC 128713 Query 50243 GAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCCA 50299 || ||||||||||| | ||||||| | ||||||| | ||||| ||| | ||| Sbjct 128712 AAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATTATTCCA 128653 Query 50300 AGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTT 50359 | | | ||| || |||||| | ||||||| ||||||||||| ||| | | ||| Sbjct 128652 ATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCTTT 128593 Query 50360 TTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGTAtt 50419 |||||||||||| | || ||| || || ||| ||||||| ||| | || |||| Sbjct 128592 TTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAAACGACGTTTATT 128533 Query 50420 tttttCTAATATCGGTTCTCGTATATTTTCTAAATTATTATATTTCAT 50467 || ||||| |||||| | |||||| | || ||| |||| || Sbjct 128532 TTCCATTAATAAAGGTTCTTG---ATTTTC-ACATAATTTAATTTTAT 128489 >seq10 Length=718177 Score = 241 bits (266), Expect = 3e-58 Identities = 192/231 (83%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | ||| |||||||||||||| | ||||| |||||||||||||| Sbjct 467985 ACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGA 468044 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 |||||||| |||| || ||||||||||||||||| |||||||| |||||||| ||||| Sbjct 468045 TAATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGG 468104 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||||||||| |||||| |||| |||||| |||| ||| || ||||| || Sbjct 468105 AATACCTTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAAC 468164 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| |||||| |||||||| ||||| ||||||| ||| || |||||||| Sbjct 468165 TTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTT 468215 >seq1 Length=2713227 Score = 215 bits (238), Expect = 1e-50 Identities = 185/229 (81%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||||||||||||| | | ||| |||||||||||||| | ||||| || | Sbjct 1439200 GTTCAATAATACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGT 1439259 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 ||||||||||||| |||| | |||| || |||||||||||||||||||||||||| |||| Sbjct 1439260 TATAATCAGATAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTT 1439319 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||| ||||| || |||||||||||||| ||||| ||| |||||| || | ||| | Sbjct 1439320 GATCTGGTGGGATACCTTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAG 1439379 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 | ||||| ||||||| ||| || |||||||| || | ||||||| ||| Sbjct 1439380 AAGATTCCACTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428 >seq4 Length=1551466 Score = 199 bits (220), Expect = 8e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | ||| |||||||| | ||| | ||||| |||||||||||| Sbjct 1333326 ATACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCA 1333385 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| |||| |||| || |||||||| || ||||| || || | |||||||| ||| Sbjct 1333386 GATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGT 1333445 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| ||||| ||| |||||| |||| ||| || ||||| Sbjct 1333446 GGAATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCA 1333505 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | |||||||||||||||||||| ||||||| ||| || ||||| Sbjct 1333506 ACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 190 bits (210), Expect = 4e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||||||| | ||| |||||||| | ||| | ||||| || || || ||| Sbjct 1333782 ATACCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCA 1333841 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| |||| |||| || ||||| ||||| || |||||||| | |||||||| ||| Sbjct 1333842 GATAAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGT 1333901 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || || ||| |||||| || | ||| || ||||| Sbjct 1333902 GGAATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCA 1333961 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||||| ||||||||||||||||||||| || || | || || |||||||| Sbjct 1333962 ACTTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 1334014 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | | |||||||| | ||| | ||||| |||||||| ||| Sbjct 1333554 ATACCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCA 1333613 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | || || ||||||||||||||||| ||||| | ||||| || || Sbjct 1333614 GACAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGA 1333673 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| |||||| |||| |||||| |||| |||||| |||||| Sbjct 1333674 GGAATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCT 1333733 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||| || || ||||||||||| || || | ||| || ||||| Sbjct 1333734 ACTTCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 |||||||| | |||| |||||| ||||||||||||||||| |||| |||| || Sbjct 1333119 ACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCT 1333178 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 |||||||| || ||||| || || | ||||||||||| || || |||||||||||||| Sbjct 1333179 AATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTTATCTTGA 1333238 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || || |||||| |||| ||| || ||||| ||||||| |||||| |||||| Sbjct 1333239 ATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAATTGTTTTA 1333298 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||||| ||| || ||||| Sbjct 1333299 CCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 >seq8 Length=720923 Score = 190 bits (210), Expect = 4e-43 Identities = 172/215 (80%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 |||||||| | ||| | ||||| ||||||||||||||||| |||| | |||| || Sbjct 254708 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTTCCATCTTCT 254767 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 ||||||||||||||||| || || | |||||||| ||||| || ||||||||||||| Sbjct 254768 AATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTAG 254827 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 |||||| |||| || ||| |||| ||| || ||||| ||||||| |||||| |||||| Sbjct 254828 ATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAAAGTAATAGTTTTA 254887 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542 |||||||| ||||| | ||| || || ||| |||| Sbjct 254888 CCAGTTAAAGTTTTGACAAAAATTTG-ATTATATT 254921 >seq29 Length=110012 Score = 127 bits (140), Expect = 4e-24 Identities = 256/376 (68%), Gaps = 11/376 (3%) Strand=Plus/Plus Query 263671 TTACATGGATTTCATATACACGAATATGGAGATTTAAGCAATGGATGTACGTCAGCTGGT 263730 ||| | || |||||||| || ||| ||| ||| | ||||| ||||| || |||||| Sbjct 46115 TTAAAAGGTTTTCATATTCATCAATTTGGTGATAATACAAATGGTTGTACTTCTGCTGGT 46174 Query 263731 GAACATTATAATCCTTTTAATAGAAACCATGGTGATATTACTGATCCTATTAATAGGCAT 263790 ||||| |||||||||||||| || |||||| | | |||| || ||| ||| Sbjct 46175 CCACATTTTAATCCTTTTAATAAAACTCATGGTTCTCCAATTGATGAAAT---TAGACAT 46231 Query 263791 TTAGGAGATTTAGGAAATGTATATGCAGATGAAAACGGGATAGCAAATGTTAATTTTCAA 263850 | ||||||||||| ||| | | | ||| ||| || ||||||| | ||| || | Sbjct 46232 GTTGGAGATTTAGGTAATATTAAAACTGATTCAAATGGTTTAGCAAAAGGTAAATTAAAT 46291 Query 263851 GATAATATTATATCTTTATATGGCGATTATAATATACTCGGAAGGAGTCTTGTAGTTCAT 263910 |||||| | || |||| ||| ||| |||| | || || | | ||||| ||||| Sbjct 46292 GATAATTTAATTAAATTATTTGGTCCATATTCTATAATTGGTAGAACTGTTGTAATTCAT 46351 Query 263911 GATTCACCTGATGATCTAGGAAAAACTAATCATCC--GTTAAGTAAAACTACTGGTAATT 263968 ||| |||||| |||| ||| | |||||| || ||||| ||||||||| Sbjct 46352 GATGGTGAAGATGATTTAGGTAAAGGTGGTCATCCAGATTCTTTAAAA--ACTGGTAATG 46409 Query 263969 CTGGCGGAAGATTAGCATGCGGTATTATTGGTAT-TGCAAAGGATTAACTAAATTTTATA 264027 |||| || ||| || || ||| | |||||| | | ||| || | ||| ||||| Sbjct 46410 CTGGTGGTAGACCTGCTTGTGGTGTAATTGGTTTATCCAATTAATAATCTA---YTTATA 46466 Query 264028 TATTTATTTAATAATT 264043 || ||||||| | ||| Sbjct 46467 TACTTATTTACTTATT 46482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479104430850