Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq15 378 1e-99 seq10 232 1e-55 seq1 203 6e-47 seq4 199 7e-46 seq8 187 5e-42 seq29 149 1e-30 >seq15 Length=386167 Score = 378 bits (418), Expect = 1e-99 Identities = 631/917 (69%), Gaps = 14/917 (2%) Strand=Plus/Minus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || ||||| ||| ||||||| ||||| || ||||| || |||| || || Sbjct 129423 TTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAAAGAAATATT 129364 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATA 38949 | ||||||||||||||||||| | ||||||| |||||| | || | | | || || Sbjct 129363 TTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTT-TATTACCTAAAGCAACTA 129305 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009 |||||||||| || ||||||||||||||||| ||||||||| |||||||||||| |||| Sbjct 129304 ATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCTAATA 129245 Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069 | | ||||| |||||| || | | |||||||| || || ||||||| |||| | Sbjct 129244 AAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTCAGTAATAA 129185 Query 39070 tcataattatattattttttgataa--tttat-atttaatatgattcgcatataGTAAAC 39126 | | || | ||| | ||| ||||| | |||| |||| | | ||| ||||| Sbjct 129184 TTTT--TTGAACAATTAATGGATTTGGTTTATTAATTAA-ATGA---GAAAATAATAAAC 129131 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 | |||||||| ||||| | |||||| || ||| | || |||||||| ||| ||||| | Sbjct 129130 AAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGTTAAAC 129071 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 |||||||||| ||||| ||||| | |||||||||||| |||||| | ||| ||||| | Sbjct 129070 CTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAAGAAAA 129011 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 |||| || ||| ||||| || | || |||| | || | | | || ||| || Sbjct 129010 TACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTATCATTAA 128951 Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366 |||| ||| ||||| || ||||||| ||| ||| | || || |||| || || |||| Sbjct 128950 TCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATTGCATTAA 128891 Query 39367 ATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTT 39426 |||| | |||||| ||| Sbjct 128890 ATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAATAAGTTT 128831 Query 39427 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATACT 39486 ||||||| | | |||||| |||||||| |||||| | ||||| | | | Sbjct 128830 CAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCAGGAATTT 128771 Query 39487 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 39546 ||||||| | | | || |||||||||||| ||| |||||||||||||| ||||| | Sbjct 128770 GAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAAGCTGCAA 128711 Query 39547 AGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCCAAG 39603 | ||||||||||| | ||||||| | ||||||| | ||||| ||| | |||| Sbjct 128710 AAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATTATTCCAAT 128651 Query 39604 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTT 39663 | | ||| || |||||| | ||||||| |||||||| || ||| | | ||||| Sbjct 128650 CATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCTTTTT 128591 Query 39664 TATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAtttt 39723 |||||||||| | || ||| || || ||| |||||||| ||| | || |||||| Sbjct 128590 TATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAAACGACGTTTATTTT 128531 Query 39724 tttCTAATATCGGTTCT 39740 ||||| |||||| Sbjct 128530 CCATTAATAAAGGTTCT 128514 >seq10 Length=718177 Score = 232 bits (256), Expect = 1e-55 Identities = 190/231 (82%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || ||| |||||||||||||| | ||||| |||||||||||| || Sbjct 467985 ACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGA 468044 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | || | || || |||||||||||||||||||||||||| ||||| || ||||| Sbjct 468045 TAATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGG 468104 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||||||||| |||||| |||| |||||| |||||||| || ||||| || Sbjct 468105 AATACCTTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAAC 468164 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| |||||| |||||||| ||||| ||||||| || || |||||||| Sbjct 468165 TTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTT 468215 >seq1 Length=2713227 Score = 203 bits (224), Expect = 6e-47 Identities = 177/220 (80%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||||||||||||| | || ||| |||||||||||||| | ||||| ||| |||||| Sbjct 1439205 ATAATACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAA 1439264 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || ||||||| || | | || || ||||||||||||||||| |||||||| ||||| || Sbjct 1439265 TCAGATAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCT 1439324 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || |||||||||||||| ||||| ||| |||||| || ||||| || ||| Sbjct 1439325 GGTGGGATACCTTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGAT 1439384 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056 || ||||||| ||| || |||||||| || | ||||||| Sbjct 1439385 TCCACTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAA 1439424 >seq4 Length=1551466 Score = 199 bits (220), Expect = 7e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | |||||||| | ||| | ||||| ||||||||| || Sbjct 1333554 ATACCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCA 1333613 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || |||| || ||||||||||||||||||||||| | |||||||| || Sbjct 1333614 GACAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGA 1333673 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| |||||| |||| |||||| ||||||||||| |||||| Sbjct 1333674 GGAATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCT 1333733 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||| || || ||||||||||| || || | || || ||||| Sbjct 1333734 ACTTCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 194 bits (214), Expect = 3e-44 Identities = 181/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || ||| |||||||| | ||| | ||||| |||||||||||| Sbjct 1333326 ATACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCA 1333385 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || |||||||| || |||||||| || | ||||| || ||| Sbjct 1333386 GATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGT 1333445 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| ||||| ||| |||||| |||||||| || ||||| Sbjct 1333446 GGAATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCA 1333505 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||||||||||||||| ||||||| || || ||||| Sbjct 1333506 ACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 190 bits (210), Expect = 4e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||||||||| ||| |||||||| | ||| | ||||| ||| || || || Sbjct 1333782 ATACCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCA 1333841 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || || ||||| ||||| || || ||||| | ||||| || ||| Sbjct 1333842 GATAAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGT 1333901 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| || || ||| |||||| || ||||| || ||||| Sbjct 1333902 GGAATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCA 1333961 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||||| ||||||||||||||||||||| || || | ||| || |||||||| Sbjct 1333962 ACTTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 1334014 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 |||| ||||| | || | |||||||| | |||| |||||| |||||||||||| | Sbjct 1333099 TACCGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAG 1333158 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 |||| | || | || || |||||||| || |||||||| || | ||||| ||||| | Sbjct 1333159 ATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAG 1333218 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | || |||||||||||||| || || || |||||| |||||||| || ||||| | Sbjct 1333219 GAATACCTTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAA 1333278 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| |||||| |||||||| || || ||||||| || || ||||| Sbjct 1333279 CTTCTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 >seq8 Length=720923 Score = 187 bits (206), Expect = 5e-42 Identities = 183/235 (78%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 |||| ||||| | || | |||||||| | ||| | ||||| |||||||||||| | Sbjct 254688 TACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAG 254747 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 |||| | || | | || || |||||||||||||||||||| || | ||||| || |||| Sbjct 254748 ATAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTG 254807 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | || ||||||||||||| |||||| |||| || ||| |||||||| || ||||| | Sbjct 254808 GAATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAA 254867 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 |||||| |||||| |||||||||||||| ||||| | || || || ||| |||| Sbjct 254868 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG-ATTATATT 254921 >seq29 Length=110012 Score = 149 bits (164), Expect = 1e-30 Identities = 261/376 (69%), Gaps = 11/376 (3%) Strand=Plus/Plus Query 239452 TTACATGGATTTCATATACACGAATATGGAGATTTAAGCAATGGTTGCACATCAGCTGGT 239511 ||| | || |||||||| || ||| ||| ||| | |||||||| || || |||||| Sbjct 46115 TTAAAAGGTTTTCATATTCATCAATTTGGTGATAATACAAATGGTTGTACTTCTGCTGGT 46174 Query 239512 GAACATTATAATCCTTTTAATAGAATCCATGGTGATATTACTGATCCTATTAATAGGCAT 239571 ||||| |||||||||||||| || |||||| | | |||| |||| | ||| Sbjct 46175 CCACATTTTAATCCTTTTAATAAAACTCATGGTTCTCCAATTGATGAAATTA---GACAT 46231 Query 239572 TTAGGAGATTTAGGAAATATAAATGCAGATGAAAATGGGATAGCAAATGTTAATTTTCAA 239631 | ||||||||||| ||||| || | ||| |||||| ||||||| | ||| || | Sbjct 46232 GTTGGAGATTTAGGTAATATTAAAACTGATTCAAATGGTTTAGCAAAAGGTAAATTAAAT 46291 Query 239632 GATAATATTATATCTTTATATGGTGATTATAATATACTTGGAAGGAGTCTTGTAGTTCAT 239691 |||||| | || |||| |||| ||| |||| |||| || | | ||||| ||||| Sbjct 46292 GATAATTTAATTAAATTATTTGGTCCATATTCTATAATTGGTAGAACTGTTGTAATTCAT 46351 Query 239692 GATTCACCTGATGATCTAGGAAAAACTAATCATCC--GTTAAGTAAAACTACTGGTAATT 239749 ||| |||||| |||| ||| | |||||| || ||||| ||||||||| Sbjct 46352 GATGGTGAAGATGATTTAGGTAAAGGTGGTCATCCAGATTCTTTAAAA--ACTGGTAATG 46409 Query 239750 CTGGCGGAAGATTAGCATGCGGTATTATTGGTATTGCAAAGGATTAACAAAAT-TTTATA 239808 |||| || ||| || || ||| | |||||| | | | ||||| || | ||||| Sbjct 46410 CTGGTGGTAGACCTGCTTGTGGTGTAATTGGTTTATCCA---ATTAATAATCTAYTTATA 46466 Query 239809 TATTTATTTAATAATT 239824 || ||||||| | ||| Sbjct 46467 TACTTATTTACTTATT 46482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135196691800