Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq15 176 1e-38 seq3 167 7e-36 seq1 165 2e-35 seq6 93.3 1e-13 >seq15 Length=386167 Score = 176 bits (194), Expect = 1e-38 Identities = 507/768 (66%), Gaps = 23/768 (3%) Strand=Plus/Plus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 |||||| | || |||||||| | | || |||||||| |||||||||||| ||| | Sbjct 128545 TTTGTTTTATTTCCAATTAAATATCATGAAATTTGGCAAATGTATAAAAAAGCTGAAGCT 128604 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGA--AGCCC 133193 | |||||||||| || ||| | |||||| ||||| | | ||| | | | Sbjct 128605 TCATTTTGGACTGCAGAAGAAATTGATTTAAGTAAAGATTTACATGATTGGAATAATCGT 128664 Query 133194 TTAC-TGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGAT 133252 ||| | |||||| | ||||||||| | ||||||| |||||||| || |||| Sbjct 128665 TTAAATAAAAATGAAAGATTTTTTATTTCAAGAGTTTTAGCATTTTTTGCAGCTTCTGAT 128724 Query 133253 GGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAG 133310 ||||||||| ||||||||||| ||| | ||| | |||||||||| | | |||| Sbjct 128725 GGTATTGTTAATGAAAATTTAGTTGAAAA--TTTTTCTGCAGAAGTTCAAATTCCTGAAG 128782 Query 133311 CCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTA 133370 | |||||||| | || ||| |||||||||||| |||||| || |||||| Sbjct 128783 CTAAATGTTTTTATGGTTTTCAAATTATGATGGAAAATATTCATTCTGAAACTTATTCTT 128842 Query 133371 CTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAA-----CTATTCAACGC 133425 || | |||||||| || ||||| |||| ||| | | | |||| || || Sbjct 128843 TATTATTAGATACTTATATTAAAGA-----TCCAAAAGAAAATAAATTTTTATTTAATGC 128897 Query 133426 CATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA 133485 ||| | |||| ||||||||| | ||| |||| |||||| | | |||||| | || Sbjct 128898 AATTGAAACAATTCCATGTATTAAACAAAAAGCTGAATGGGCTTTAAGATGGATTAATGA 128957 Query 133486 CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttttt 133545 || ||| | |||| | | ||||||||||||| || || || ||||| || Sbjct 128958 TAATGATGCTTTATATGCTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATTTTCTT 129017 Query 133546 CAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604 | ||| | || ||| || || |||||| | ||||| | ||| | | || || | Sbjct 129018 CTCTGGATC-TTTTGCTTCAATATTTTGGTTAAAAAAAAGAGGTTTAATGCCAGGTTTAA 129076 Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTAC 133664 ||||| || ||| | |||| || || || | ||||| || || ||||| |||| Sbjct 129077 CATTTTCAAATGAATTAATTTGTAGAGATGAAGGTCTTCATACTGATTTTGCTTGTTTAT 129136 Query 133665 TTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAA-GATTGAAGAAATTATTAGAGAA 133723 | ||| | ||| | | | |||| | ||| || || ||||||||| ||| Sbjct 129137 TATTTTCTCATTTA-ATTAATAAACCAAATCCATTAATTGTTCAAAAAATTATTACTGAA 129195 Query 133724 GCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCCGTGC-CGTTTAATTGGTAT 133782 || ||||| ||||| || | | | | | |||| | || ||| |||| | ||||| Sbjct 129196 GCTGTTGATATTGAAAAAGATTATTTTACTGATGCTTTACC-TGCTTCTTTATTAGGTAT 129254 Query 133783 GAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATT 133830 |||| | | ||| | ||| |||||||||| || || ||||| Sbjct 129255 GAATTGTAAATTAATGTGTCAATATGTTGAATTTGTTGCAGATAGATT 129302 >seq3 Length=2066014 Score = 167 bits (184), Expect = 7e-36 Identities = 346/513 (67%), Gaps = 9/513 (2%) Strand=Plus/Plus Query 156011 AATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACC 156067 ||| |||| ||| ||| || ||||| || ||||| |||| | | || ||||| Sbjct 1414715 AATGTCAGCATGCCATGGTTCAAGATAGATTGCAAAGGCACCAGGACGTTTATTACCACC 1414774 Query 156068 CTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGA 156127 ||||| ||||| | |||||| ||||||| || | || ||| || |||||||||||||| Sbjct 1414775 TTGATCAACATATCTTGCAGTCATATTGAATACTCTTAACATTGGGATAATACCATTGGA 1414834 Query 156128 AGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187 ||| ||||| || || ||||| ||||| | || | | |||||||||||||| || Sbjct 1414835 AGTACCATTAGTACCTGCAATATATGAACCGGTTGCTCTGATATTATGAATATGTAAACC 1414894 Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247 |||||||| | ||| ||||| || ||| | ||||| ||| ||||| | Sbjct 1414895 TATACCACCAGCATGTTTTGAAATAACGGCCATTTCAGACAAAGTATCGAATATACCATT 1414954 Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307 || |||||||| | ||||| | ||| | || ||| | ||| || ||| ||||| Sbjct 1414955 TATTGAATCATCCTTCATTGCAACAAGAAAACAAGAAGACATTTGCGGCTTTGGAGTTCC 1415014 Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGT 156367 ||| ||||||| ||| || | |||||| | ||||| || |||||| ||| || || Sbjct 1415015 AGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATTTTAGAGACATTAAATTATAAGT 1415074 Query 156368 CTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATG 156427 || || ||| | |||| || ||||||| | | || ||||| || ||| Sbjct 1415075 TTCAAGAACACGCTCGATATTATCACCATGAATACCAACCGCAACTCTCATAATCAAATG 1415134 Query 156428 CTGAGGACGCTCTACAATCACT---CCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGT 156484 ||||| | || | |||| |||| ||||| | | || | | ||| ||||| Sbjct 1415135 TTGAGGTCTTTCGGC---CACTTTACCATTAATTCTTAATAAATAAGATCTTTCAAGAGT 1415191 Query 156485 TTTAAACCCGAAATAATCAAACAGAAAATCACG 156517 |||||| || ||| ||| | | |||||||| Sbjct 1415192 TTTAAAGCCAAAAAAATTATAGTTGAAATCACG 1415224 Score = 149 bits (164), Expect = 2e-30 Identities = 348/520 (67%), Gaps = 10/520 (2%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| || |||| | ||| || | ||||| | ||| | ||| ||||| || Sbjct 1804687 CTATCAAATCTTCCAGGTCTTAATAAAGCCGAATCTAAAACATCTGGTCTATTTGTACCT 1804746 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 | || ||||| | | |||| | ||| |||||||| ||| | |||||| Sbjct 1804747 GATAAAACAACGACATGATCGGATGTTGAAAAACCATCCATTTCAACTAATAACTGATTA 1804806 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTG--AATCACCCGAATCGCTCCtttttt 289027 || || ||| ||||| ||||| | ||| | | |||| || | | || | || Sbjct 1804807 AGAGTGGTTTCTCTTTCGTCATTAGCACCACCTCCTAATCCACCTT-TAGTTC-TAGCTT 1804864 Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 |||||| |||||||||||||||| ||||| | | |||| ||||| ||| ||| || Sbjct 1804865 TACCAATTGCATCAATTTCGTCAACAAAAATAATCGATGGAGCATTTTCTCTAGCAGTTT 1804924 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 ||| || ||||| ||||| || || || | |||||| ||||||| ||||| ||||| Sbjct 1804925 TAAACAAATCTCTAACACGTGAAGCACCTACTCCAACAAACATTTCAACAAACTCAGATC 1804984 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | ||||| || ||| | || ||||| ||||| || || || | | || | Sbjct 1804985 CAGATACAGAAAAGAAAGGAACCCCAGCTTCACCTGCAGTAGCTCTGGCTAATAAAGTTT 1805044 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267 |||| || || || || || || | | || | || | ||||| || | ||| Sbjct 1805045 TACCAGTACCTGGAGGACCAGACAAAATGGCACCTCTAGGAATTTTTG---CACCTAACT 1805101 Query 289268 T---ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324 | |||||||| ||| |||| ||||||| ||||| |||| || ||| | |||||| | Sbjct 1805102 TTTCATATTTCTTTGGGTTCTTCAAAAATTTTACAAATTCCATAATTTCTTCTTTTGCTT 1805161 Query 289325 CATCACATCCTGCTACATCAGCAAAAGTAATATTAATATC 289364 | ||||| || || ||||| |||| ||| || ||||| Sbjct 1805162 CGTCACAACCAGCGACATCTTTGAAAGAAATTTTGATATC 1805201 >seq1 Length=2713227 Score = 165 bits (182), Expect = 2e-35 Identities = 346/515 (67%), Gaps = 3/515 (1%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | ||||||| ||||| | ||| | ||| ||||| || Sbjct 604260 CTATCAAATCTACCTGGTCTTAATAATGCTTTATCTAAAACATCTGGTCTATTTGTACCT 604201 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || || ||||||| | || | | |||||||||||| ||| | |||||| Sbjct 604200 GCTAAAACAACAACATGATCTGAACTTTCAAATCCATCCATTTCAACTAATAATTGATTT 604141 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | |||| ||| |||||||||||| |||| | | | | | |||| |||| Sbjct 604140 AATGTTGCTTCTCTTTCATCATTT---CCTCCCATACTATTTTTACCACCTCTTTCTTTA 604084 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| ||||||||||| |||| ||||| | || | ||| ||| ||| || | Sbjct 604083 CCAATTGCATCAATTTCATCAACAAAAATTATTGCTGGTGCCATTTTTCTTGCATTTTTA 604024 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 ||||| ||||| || | || ||||||| |||||| ||||||| |||||||| || | Sbjct 604023 AATAAATCTCTAACTCTTGAAGCTCCAACTCCAACAAACATTTCAACAAATTCTGATCCA 603964 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 ||| | |||| |||| |||||| |||||| ||| | || | | ||| ||| Sbjct 603963 CTAACTGATAAAAATGGTACACCTGCTTCTCCTGCTGTTGCTTTTGCTAATAATGTTTTA 603904 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTA 289269 ||||| || |||||||| ||| | | || |||| | |||||| || | | Sbjct 603903 CCTGTACCTGGTGGTCCTGATAAAATTGCACCTCTTGGAATTTTTGCACCTAATTTTTCA 603844 Query 289270 TATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCA 289329 ||||| ||| | |||||||||| |||| |||| || ||| | ||| || || ||| Sbjct 603843 TATTTTGAAGGATTTTTTAAAAATTGAACAAATTCCATAATTTCTTCTTTCGCTTCTTCA 603784 Query 289330 CATCCTGCTACATCAGCAAAAGTAATATTAATATC 289364 || ||||| ||||| ||| | || || ||||| Sbjct 603783 CAACCTGCAACATCTTTAAATTTTATTTTTATATC 603749 >seq6 Length=1153196 Score = 93.3 bits (102), Expect = 1e-13 Identities = 204/299 (68%), Gaps = 10/299 (3%) Strand=Plus/Minus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 ||||| ||||| |||||| | ||| ||||| ||||| | |||| || ||| Sbjct 461921 CTTTTACCACCAATAGCATCTAATTCATCAATAAAAATTATTGCTGGAGCTCTTGATCTT 461862 Query 289081 GCA--ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAA 289138 || ||| ||||||||||||||| | ||| |||| ||||||||| | ||| ||| Sbjct 461861 GCTTGATT--AAATAATTCTCTTACTCTTTTTGCACCAACACCAACATATAATTCATCAA 461804 Query 289139 ATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCA 289198 |||||||| | || | || || | |||| ||||| || || ||| || || | Sbjct 461803 ATTCAGAACCAGACATAAAAAAAAAAGGTACACCAGCTTCACCAGCAGTTGCTCTTGCTA 461744 Query 289199 GAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCC 289258 | || ||||| || || || || || ||| || || || ||||||| ||| | | Sbjct 461743 ATAAAGTTTTACCAGTACCTGGAGGACCAGTTAAAAGTACACCTTTTGGTAATTTACCAC 461684 Query 289259 CAGCAGAC--TTATATTT-CTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCA 289314 || |||| || |||| || | || |||||||||| ||||||||| || | |||| Sbjct 461683 CA--AGACCAGTAAATTTACTTGGATCT-TTTAAAAATTGTACAATTTCTTCTAATTCA 461628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816261105927