Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 158 1e-33 seq8 141 8e-29 seq1 125 6e-24 >seq4 Length=1551466 Score = 158 bits (174), Expect = 1e-33 Identities = 168/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| |||| |||||||| ||||| | ||||| ||| | | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | |||| ||||| || ||||| ||||||||||| || || ||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAA-ATTCAAGATAAAGAAGGAATTCCACCAGATCA 1333437 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||||||||| |||||||| ||||| | || ||| |||| | | || |||||||| Sbjct 1333436 ACAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAA 1333377 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 |||||||| ||||| || || || || || || |||| Sbjct 1333376 TATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATT 1333338 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| | || |||||||| ||||| | ||||| ||| | | Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| ||||| |||||||| || ||||| |||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| |||||||| ||||| | || ||| |||| | | || |||||||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || ||||| || || || Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGT 1333119 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || |||| |||||||| ||||| | ||||| ||| | | Sbjct 1334011 ATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCATCT 1333952 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || ||| |||||||||||| ||||||||||| || || |||||| Sbjct 1333951 GATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACCAGATCAA 1333892 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| ||||| ||||| || || | || ||| |||| | || || || ||| Sbjct 1333891 CAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 1333832 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||||||| ||||| || || || || || || Sbjct 1333831 ATTCAAAAAGAATCAACTCTTCATTTAGTCTT 1333800 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || |||| ||||| || || || | ||||||||| | | Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| || || ||||| |||||||| || ||||| || ||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| || ||||| || ||||| | || || |||| |||| || ||||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| ||||| || || || || || Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGT 1333575 >seq8 Length=720923 Score = 141 bits (156), Expect = 8e-29 Identities = 168/225 (75%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 24707 CAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGAC 24766 || || ||| | ||||| |||| |||||||||||||| | ||||| ||| || | || Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 24767 ACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 || | || |||| ||||| ||| ||| |||| |||||||| || || || |||||||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAA-ATCTAAGATAAAGAAGGTATTCCACCAGATCAACA 254795 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885 ||||||||| ||||| || ||||| | || ||| |||| | | || |||||||| || Sbjct 254794 ACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATAT 254735 Query 24886 TCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| || || || || || | |||| | ||||| Sbjct 254734 TCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGG 254690 >seq1 Length=2713227 Score = 125 bits (138), Expect = 6e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24712 CTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGT 24771 |||| ||||||| || || ||||||||||| || | ||||| ||| | | || || | Sbjct 1439429 CTTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCAT 1439370 Query 24772 AGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTT 24830 || || | |||| | ||| || ||||| |||||||| || || || ||||||||| | | Sbjct 1439369 TGATAATGTTAAATCCAAA-ATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGAT 1439311 Query 24831 TGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAA 24890 | |||||||| || ||||| | || ||| |||| | || |||||||||||||||| Sbjct 1439310 TAATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAA 1439251 Query 24891 AGGAATCGACACTACACTTGGTGTTGCGATT 24921 | ||||| || |||| || || || |||| Sbjct 1439250 AAGAATCAACTTTACATTTAGTTTTAAGATT 1439220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897200715880