Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq10 122 7e-23 seq4 98.7 8e-16 seq8 84.2 2e-11 seq1 82.4 6e-11 >seq10 Length=718177 Score = 122 bits (134), Expect = 7e-23 Identities = 178/252 (71%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 || ||||||||||| ||||| ||||| ||||| || ||||| ||||| | ||| || Sbjct 468218 TTAAAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAA 468159 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 || |||||| | | | || ||| || ||| || |||||||| | || Sbjct 468158 TCTTCTGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCA 468099 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 |||||||||||| | |||| ||| |||||||| | || |||| |||||| | | ||| Sbjct 468098 GATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGAT 468039 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG-----AA 110501 || || |||||||||||||| || || || | || |||||| | |||| || || Sbjct 468038 TATAATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGGTGGTAAA 467979 Query 110502 AAAATAAATAAG 110513 |||| ||| ||| Sbjct 467978 AAAAGAAAGAAG 467967 >seq4 Length=1551466 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || |||||||||||| | ||| || | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || |||||||| | || |||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | |||| ||| || ||||| | || |||| ||||| | | ||||| || Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || | || | || |||||| | |||| || Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGG 1333329 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 || ||||||||||| || ||||| |||||||| || ||||||||||| | ||| || Sbjct 1334017 TTCAAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAA 1333958 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 | ||||| | | | || ||| ||||| || |||||||| | || Sbjct 1333957 TCATCTGATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACCA 1333898 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 ||||||||| | | || | || ||||| || | || |||| ||||| | | || Sbjct 1333897 GATCAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 1333838 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||||||||| || | || | || |||||||| |||| || Sbjct 1333837 TACAACATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAGACTTAGAGGTGG 1333785 >seq8 Length=720923 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 110276 CAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGAT 110335 ||||| ||||||||||||||||| || ||||| ||||| | ||| || | ||| Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 110336 ACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAA 110395 ||| | | | || ||| || || || |||||||| | || ||||||||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACAA 254794 Query 110396 AGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATT 110455 | | |||| ||| |||||||| | || |||| ||||| | | ||||| || ||| Sbjct 254793 CGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATATT 254734 Query 110456 CAAAAAGAATCTAC 110469 ||||||||||| || Sbjct 254733 CAAAAAGAATCAAC 254720 >seq1 Length=2713227 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341 ||||| ||||| | || || ||||| || || | ||| ||| || ||||| | Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401 | | || ||| || ||| || |||||||| | || |||||||||||| | Sbjct 1439368 GATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTA 1439309 Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461 || | ||| |||||||| | || |||| ||||| | | ||||| |||||||||||| Sbjct 1439308 ATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAA 1439249 Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || | || |||||| | |||| || Sbjct 1439248 GAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG 1439211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841242763003