Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq10 230 4e-55 seq4 194 3e-44 seq8 188 1e-42 seq1 174 2e-38 seq29 95.1 2e-14 >seq10 Length=718177 Score = 230 bits (254), Expect = 4e-55 Identities = 187/227 (82%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| |||||||| |||||||||||| | || || ||| | | Sbjct 468211 TGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATCTTCTG 468152 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| |||| |||||| ||| ||||||||| |||||||| ||||||| Sbjct 468151 ATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAAC 468092 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | |||||||| |||||||||||||| ||| |||||| ||| | |||||||||| Sbjct 468091 AAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTATAATA 468032 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||||||||| ||| | |||||||| ||| |||||||||| ||| Sbjct 468031 TTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGGT 467985 >seq4 Length=1551466 Score = 194 bits (214), Expect = 3e-44 Identities = 182/229 (79%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | ||||| ||||| || ||||| ||||| | || || ||| ||| Sbjct 1333554 TGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT- 1333496 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| | ||||| ||| ||||| ||| ||||||||| |||||||| |||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | |||||||| || ||||||||||| ||| |||||| ||| | ||||||||| Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||||||||| ||| | |||||||| ||| |||||||||| |||| Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGGTA 1333327 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || || ||||| ||| | || |||||| | | Sbjct 1333782 TGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCAG 1333723 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| |||| |||||| ||| ||||||||| ||||| || || |||| Sbjct 1333722 ATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAAC 1333663 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| |||||||||||||| || |||||| || | || ||||||| Sbjct 1333662 AACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAATA 1333603 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| ||| | |||||||| | |||||||||| |||| Sbjct 1333602 TTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGTGGTA 1333555 Score = 174 bits (192), Expect = 2e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | ||||| || ||||| |||||||||||| | || || ||| ||| Sbjct 1333326 TGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT- 1333268 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| | ||||| || || || ||| ||||||||| ||||| || |||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | |||||||| || ||||||||||| ||| |||||| ||| | ||||||||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAA 146260 || |||||||| || || | |||||||| | |||||||||| ||||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGGTAA 1333098 Score = 158 bits (174), Expect = 2e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | || || ||||| || ||||| |||||| | || || ||| ||| Sbjct 1334010 TGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCATCT- 1333952 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| ||| || || ||| ||||||||| |||||||| |||||| Sbjct 1333951 GATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACCAGATCAA 1333892 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | || || || ||||| |||||||| ||| |||||| ||| | || || || Sbjct 1333891 CAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 1333832 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||||||||| ||| | |||||||| ||| || | ||||| |||| Sbjct 1333831 ATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAGACTTAGAGGTGGTA 1333783 >seq8 Length=720923 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146034 CAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGAT 146093 ||||| || | ||||| ||||| || ||||| |||||| | || || ||| ||| Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 146094 ACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAA 146153 |||||| | || || |||| |||||| || ||||||||| |||||||| ||||||||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACAA 254794 Query 146154 AGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATA 146213 | | |||||||| |||||||||||||| ||| ||||| ||| | ||||||||||| Sbjct 254793 CGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATATT 254734 Query 146214 CAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAA 146260 ||||||||||| ||| | |||||||| | |||||||||||||||| Sbjct 254733 CAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGGTAA 254687 >seq1 Length=2713227 Score = 174 bits (192), Expect = 2e-38 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 ||||| | ||||| ||||| || ||| | || || ||| | ||||| ||| | ||| Sbjct 1439422 AAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATTGATAAT 1439363 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || ||| ||||| ||| ||||||||| || ||||| |||||||||||| | || ||| Sbjct 1439362 GTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTAATCTTT 1439303 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || |||||||||||||| ||| ||||| ||| | |||||||| || ||||||||||| Sbjct 1439302 GCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAAGAATCA 1439243 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | |||||||| ||| |||||||||| |||| Sbjct 1439242 ACTTTACATTTAGTTTTAAGATTAAGAGGTGGTA 1439209 >seq29 Length=110012 Score = 95.1 bits (104), Expect = 2e-14 Identities = 181/260 (70%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 77069 GGATTTCATATTCATAATTTTGGTGCTATATC---TGGATGTAATACAGTAGGTAAACAC 77125 || |||||||||||| | ||||||| || | ||| |||| | | | ||| ||| Sbjct 46121 GGTTTTCATATTCATCAATTTGGTGATAATACAAATGGTTGTACTTCTGCTGGTCCACAT 46180 Query 77126 TTTAATCCATATAATAAAAATCATGGAGCACCATATTCTATTGAA--AAACATTTAGGAG 77183 |||||||| | |||||||| |||||| | ||| ||| || || | |||| | |||| Sbjct 46181 TTTAATCCTTTTAATAAAACTCATGGTTCTCCA-ATTG-ATGAAATTAGACATGTTGGAG 46238 Query 77184 ATTTAGGTAATATAATAGTTAATGAAAATGGCATGGCCATTG-TAGATGAATATTATAAT 77242 ||||||||||||| | | | || |||||| | || | | || || || || ||||| Sbjct 46239 ATTTAGGTAATATTAAAACTGATTCAAATGGTTTAGCAAAAGGTAAATTAA-ATGATAAT 46297 Query 77243 TTCTTAACATTATCAGGTAATGATAGTATTATGGGCAGATCATTAGTGATACATAGTAAT 77302 || | | ||||| ||| || ||| || || ||| | | || || ||| | | Sbjct 46298 TTAATTAAATTATTTGGTCCATATTCTATAATTGGTAGAACTGTTGTAATTCATGATGGT 46357 Query 77303 GAAGATGATTTAGGTAAGGG 77322 ||||||||||||||||| || Sbjct 46358 GAAGATGATTTAGGTAAAGG 46377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786165702277320