Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq10 165 6e-36 seq4 156 3e-33 seq8 147 2e-30 seq1 140 2e-28 >seq10 Length=718177 Score = 165 bits (182), Expect = 6e-36 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| | || |||||||||||||| |||||||| | | || | | ||| || Sbjct 468004 ACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTACCATCTTCT 468063 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || |||||||| ||||| || |||||||| ||||| ||||| Sbjct 468064 AATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGA 468123 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | ||| ||| ||| | || | ||| |||||| ||| ||||| | ||| || ||||| Sbjct 468124 ATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGTTTTA 468183 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 || ||||||||||||||||| || |||||||| ||| Sbjct 468184 CCTGTTAAGGTTTTAACAAAAATTTGCATTTTTAAA 468219 >seq4 Length=1551466 Score = 156 bits (172), Expect = 3e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || |||||||| || |||||||||||||| |||||||| | | ||| | | ||| || Sbjct 1333347 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCT 1333406 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| || ||| | ||||| | ||| ||||| || ||||| || ||||| ||||| Sbjct 1333407 AATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCTTG- 1333465 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||||| ||| ||| | || | ||| ||||| ||| ||||| | || || ||||| Sbjct 1333466 AATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGTTTT 1333525 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| ||||||||||| || ||||| Sbjct 1333526 ACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || |||||||| || |||||||||||||| ||||| || | | || | | || Sbjct 1333572 AGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACCGTCT 1333631 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| |||||| | || || | ||| || || || |||||||| ||||| ||| Sbjct 1333632 TCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTTATCT 1333691 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||||||| | || | ||| || ||| ||||||||| | ||| || || Sbjct 1333692 TGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGATTGTC 1333751 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||||||||| || ||||| || ||||| Sbjct 1333752 TTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 138 bits (152), Expect = 9e-28 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || |||||||| || || ||||||||||| |||||||| | | ||| | | ||| Sbjct 1333116 AGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCT 1333175 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| || ||| | ||||| | ||| ||||| || |||||||| ||||| ||| Sbjct 1333176 TCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTTATCT 1333235 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | || ||| | || | ||| ||||| ||| ||||| | ||| || || Sbjct 1333236 TG-AATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAATTGT 1333294 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || ||||||||||| || ||||| Sbjct 1333295 TTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || |||||||| || ||||||||||||||||| || || | | || | | ||| || Sbjct 1333803 ACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCT 1333862 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || || || | || || | ||| ||||| || ||||| || ||||| ||||| Sbjct 1333863 AATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCTTGG 1333922 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | ||| ||| ||| | || | || ||||| ||| ||||| | ||| || ||||| Sbjct 1333923 ATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTAATGGTTTTA 1333982 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 |||||||| || || || || || |||||||| ||| Sbjct 1333983 CCAGTTAAAGTCTTGACGAAAATTTGCATTTTGAAA 1334018 >seq8 Length=720923 Score = 147 bits (162), Expect = 2e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || || | || || |||||||| || |||||||||||||| |||||||| | Sbjct 254690 CCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAT 254749 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || | |||||| |||||| | ||||| | ||| ||||| || ||| Sbjct 254750 AAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 254809 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||| |||| | ||| ||| || | || | ||| ||||| ||| ||| Sbjct 254810 ATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACT 254869 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTG 29783 || | ||| |||||||| |||||||| ||||| ||||| || || Sbjct 254870 TCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913 >seq1 Length=2713227 Score = 140 bits (154), Expect = 2e-28 Identities = 153/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| | || ||||||||||||||||||||||| | | || | ||| || Sbjct 1439229 ACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCTTCT 1439288 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || |||||||| ||||| || || ||||| ||||| ||||| Sbjct 1439289 AATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTG- 1439347 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||| ||| | || | || |||||| ||| ||||| | ||| |||||||| Sbjct 1439348 AATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGTTTT 1439407 Query 29757 GCCAGTTAAGGTTTTAACAAA 29777 || || | |||||||||||| Sbjct 1439408 ACCTGTAAGGGTTTTAACAAA 1439428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218866665011