Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01]
71 sequences; 20,313,720 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 9e-18
seq1 104 3e-17
seq3 84.2 3e-11
>seq5
Length=1213637
Score = 105 bits (116), Expect = 9e-18
Identities = 418/641 (65%), Gaps = 35/641 (5%)
Strand=Plus/Plus
Query 201544 TTAAAATTGTTATTGGTCAGATACGTATACCAGAAATTGGAGATAAATTTTGTTCTGGA- 201602
||||| || | || | || | | | | ||||||| ||||||||||||||| ||| ||
Sbjct 902976 TTAAACTTTTAATGAGACAAACAAGAAGACCAGAACTTGGAGATAAATTTTCTTCAAGAC 903035
Query 201603 ATGGCCCAAAAAGGAACTTGTGGTATGATTTATGCA-CAAGAAGATATGCCGTTTACACA 201661
|||| ||||||||| ||||||||| | |||| | ||||||||| | || |||| |
Sbjct 903036 ATGG-ACAAAAAGGAGTTTGTGGTAT-AATTATAAATCAAGAAGATTTACCATTTAATGA 903093
Query 201662 ATCGGGTATGACCCCGGATATTATAATCAATCCAAATTGTATACCATCAAGAATGACCAT 201721
||||| | || |||||||| || |||||| || || | |||||| | ||||| |
Sbjct 903094 TGATGGTATATCACCAGATATTATTATGAATCCACATGGTTTTCCATCACGTATGACAGT 903153
Query 201722 AAATCAAATAATTGCAACTGTTAT-GGGTAAATTATACCTAACGAATCCACAATCTAAAT 201780
| |||| ||| || | ||| |||||| | | |||| || ||
Sbjct 903154 TGGTAAAATGCTTG-AATTAATATCAGGTAAAGCAGGGGTTTTGAAT------GGTACAT 903206
Query 201781 TTAAACAAGGTAATCCAT-TTATGGAGAATTCAAGCACTATTTTAAATGAATTATGTGAT 201839
| || | |||| ||| || ||||| || | | ||| | || ||||| |
Sbjct 903207 TAGAATATGGTA---CATGTTTTGGAGGAT-------CAAAATTAGAAGA--TATGTCAA 903254
Query 201840 GAACTT--ACAAAACATGGATTTGACTCGACAGGAGGAGAAACAATGTATTGTGGTTTTA 201897
|| || | | | |||||| | |||| ||| | | |||| ||| |||
Sbjct 903255 AAATTTTAATTGATAAAGGATTTAGTTATTCAGGTAAAGATCAATTATATTCAGGTATTA 903314
Query 201898 CCGGAAGAAAAATTCAAAGTA-AAATTTTTATAGGCCCAACATACTATCATCGTCTTAAA 201956
| || |||| || ||| | | || ||| | || |||| || ||||| | |||
Sbjct 903315 CTGG-AGAATGTTTACAAGCATATATATTTTTTGGGCCAATTTATTATCAAAAATTAAAA 903373
Query 201957 CATATGGTTAAGGATAAAATGCATGCGAG---AAGTCATGGTCAAGTAACAACATTACAT 202013
|||||||||| |||||| |||||||| || ||| | | |||| | || |||
Sbjct 903374 CATATGGTTATGGATAAGATGCATGCAAGAGCAAG--AGGACCAAG-AGCAGTTTTAACA 903430
Query 202014 CGTCAACCAAACTGTGGTCGGTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAA 202073
| ||||||| ||| | || ||| ||||||||||| ||||||||||||| |
Sbjct 903431 AGACAACCAACAGAAGGTAGAAGTAGAGATGGAGGATTAAGATTAGGAGAAATGGAAAGA 903490
Query 202074 GATTGTATTTTGGTTCATGGGGCCACACAATTTTTAAATGAAAGAATGTTTTTGTATTCA 202133
|||||| || | | |||| || ||||||| ||| |||||| | | || | |||
Sbjct 903491 GATTGTGTTATAGCATATGGAGCATCACAATTATTATTAGAAAGATTAATGTTATCATCA 903550
Query 202134 GATCCTTTTCAAATCGATGTGTGTACAAATTGTGGAATGAT 202174
||| |||| | | ||||| |||| || |||||| ||||
Sbjct 903551 GATGTTTTTGATGTTGATGTTTGTAATAAATGTGGATTGAT 903591
>seq1
Length=2713227
Score = 104 bits (114), Expect = 3e-17
Identities = 117/154 (76%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 122012 CCATGGAAATTACAAGAAGAACTTAAACATTTTCAAGAAGTAACAACTTGTACCCAAGAT 122071
||||||| ||| |||||||| | ||| ||||| ||||||| | ||| || ||
Sbjct 803838 CCATGGAGATTGAAAGAAGAAATGAAATATTTTGTTAAAGTAACTTCAAATACAAAA-AT 803780
Query 122072 AAAAC-TaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAA 122130
|||| ||| |||||||| |||||||||||| ||||||||||||| |||||||| |||
Sbjct 803779 AAAAGATAATAAAAATGCAGTTATTATGGGTAGAAAAACTTGGGAAAGTATTCCAATTAA 803720
Query 122131 ATTTAAACCATTAAAAAATCGAGTAAATATAATA 122164
|||| ||||||| ||| || | ||| | |||
Sbjct 803719 ATTTCGTCCATTAATGAATAGAATCAATGTTATA 803686
>seq3
Length=2066014
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/163 (72%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 120195 ACTTATGGTAGAATTGCTTCAAGATCTGGTTTATCATTTAAACATGGGATTGAAGTAGGA 120254
|| ||||||||| |||| ||||||| |||||| || ||||| |||| ||| ||
Sbjct 1455461 ACATATGGTAGAGTTGCACCAAGATCGGGTTTAGCAGTTAAAAATGGAATTACCACTGGT 1455520
Query 120255 GCGGGTGTTATTGATGAAGATTATCCCAATGA-GTTAATGATTATTTTGCACAACCATTC 120313
|| || |||||||||| ||||||| || ||||| ||| |||| ||| | |||
Sbjct 1455521 GCTGGAGTTATTGATGCAGATTATAGAGGAGAAGTTAAA-ATTGTTTTATTCAATCTTTC 1455579
Query 120314 AGACACCGATTTCAAAGTTGAAGTAGGGGATAGAATTGCCCAA 120356
||| | || || ||| || || ||| ||||||||||| |||
Sbjct 1455580 AGATAAAGAATTTAAAATTAAAAAAGGTGATAGAATTGCACAA 1455622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655279418439000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |