Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4 147 1e-30 seq10 123 2e-23 seq1 122 6e-23 seq8 104 2e-17 >seq4 Length=1551466 Score = 147 bits (162), Expect = 1e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | ||| || ||||| ||||| |||||||| || || ||||| || Sbjct 1333328 ACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGA 1333387 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || |||||||||||||||||||||||||| || |||||| | || Sbjct 1333388 TAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGG 1333447 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| || || ||||| || | || || |||||| | Sbjct 1333448 AATTCCTTCTTTATCTTGAATTTT-TGATTTAACATTATCAATAGTATCAGATGATTCAA 1333506 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| ||||| ||||| |||||||| |||||| Sbjct 1333507 CTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCATA 1333556 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| || | | || ||||| || || ||||||||| || || ||||| || Sbjct 1333100 ACCGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGA 1333159 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || |||||||||||||||||||||||||| || ||||| | || Sbjct 1333160 TAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGG 1333219 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||| || | | ||||| || | || || |||||| | Sbjct 1333220 AATACCTTCTTTATCTTGAATCTT-GGACTTAACATTATCAATAGTATCAGATGATTCAA 1333278 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || ||||||||||| || ||||| ||||| || |||||| Sbjct 1333279 CTTCTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCATA 1333328 >seq10 Length=718177 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| || | ||| || ||||||| ||| |||||||| || || ||||| | Sbjct 467984 CACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAG 468043 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | ||| | | || || |||||||| || |||||||| || | || |||||| | | Sbjct 468044 ATAATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTG 468103 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCC 33699 | | ||||||||| || |||||| ||| ||||| ||| || || ||||| Sbjct 468104 GAATACCTTCTTTATCTTGAATTTTACTTTT-AACATTATCAATAGTATCAGAAGATTCA 468162 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || |||||||||||||| ||||| ||||| || ||||| Sbjct 468163 ACTTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCAT 468212 >seq1 Length=2713227 Score = 122 bits (134), Expect = 6e-23 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | ||| || ||||||| ||| |||||||| ||||| ||||| || Sbjct 1439210 ACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGA 1439269 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | | || || |||||||| || ||||| || || | || |||||| | || Sbjct 1439270 TAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGG 1439329 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||||||||| || |||||| ||| ||||| ||| ||| || ||||||| Sbjct 1439330 GATACCTTCTTTATCTTGAATTTTGGATTT-AACATTATCAATGGTATCAGAAGATTCCA 1439388 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAG 33741 | || | ||||| ||||||||||| | ||||| |||||| Sbjct 1439389 CTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAAG 1439429 >seq8 Length=720923 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| || | | || ||||| ||||| |||||||| || || ||||| || Sbjct 254689 ACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGA 254748 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | | || || |||||||| || |||||||||||||| || |||||| | || Sbjct 254749 TAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGG 254808 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| ||| ||| | || | || || ||||| | Sbjct 254809 AATACCTTCTTTATCTTAGATTTT-ACTTTTAACGTTATCAATAGTATCAGAGGATTCAA 254867 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 | || | || || |||||||| ||||| ||||| ||||| || || Sbjct 254868 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703715568320