Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 9e-16 seq10 89.7 5e-13 seq8 89.7 5e-13 seq1 89.7 5e-13 >seq4 Length=1551466 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| ||||| | |||| ||||||||||| || || || | ||| | |||| Sbjct 1333344 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCT 1333403 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | ||||| |||| | | || | ||| ||||||||||| || || ||||||||||| Sbjct 1333404 TCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCT 1333463 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||||||| ||| | | || | |||||| | | || ||||| | || | ||| Sbjct 1333464 TGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGTT 1333523 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| | |||||| | || || ||||| Sbjct 1333524 TTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 || || ||||| | |||| |||||||||||||||||||| | || | |||| Sbjct 1333800 AAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCT 1333859 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | || ||||||| |||||| ||| ||||||||||| || || ||||||||||| Sbjct 1333860 TCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCT 1333919 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 || ||| ||| | | || | ||||| | | || ||||| | || | ||| Sbjct 1333920 TGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTAATGGTT 1333979 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| | ||| || | |||||| ||||| Sbjct 1333980 TTACCAGTTAAAGTCTTGACGAAAATTTGCAT 1334011 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | | |||||||||||||| || || || | ||| | |||||| Sbjct 1333118 AACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTC 1333177 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||||| |||| | | || | ||| |||||||| ||||| || ||||||||||| Sbjct 1333178 TAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTTATCTTG 1333237 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || || | | || | |||||| | | || ||||| | || | ||||| Sbjct 1333238 AATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAATTGTTTT 1333297 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| |||| |||||| | ||||| ||||| Sbjct 1333298 ACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | |||| ||||||||||| || ||||| || || | ||||| Sbjct 1333574 AACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACCGTCTTC 1333633 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||| | | | |||| ||| ||||| |||||||| || ||||||||||| Sbjct 1333634 TAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTTATCTTG 1333693 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | || | |||||| | | || ||||| | || | || || Sbjct 1333694 AATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGATTGTCTT 1333753 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| | || || | ||||| ||||| Sbjct 1333754 ACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 >seq10 Length=718177 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAATC 131970 ||||| ||||||| |||| ||||||||||| || || || | | ||| | | | || Sbjct 468001 AAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTACCA-TC 468059 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | |||||||| | | | |||| | ||||||||||| || || ||||||||||| Sbjct 468060 TTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATC 468119 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | || | |||||| | | || ||||| | || | || Sbjct 468120 TTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGT 468179 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| || | ||||| | ||||| ||||| Sbjct 468180 TTTACCTGTTAAGGTTTTAACAAAAATTTGCAT 468212 >seq8 Length=720923 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | |||| ||||||||||| || || || | ||| | |||||| Sbjct 254707 AACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTTCCATCTTC 254766 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||| | | | || | ||| ||||||||||| || || ||||||||||| | Sbjct 254767 TAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTATC-TT 254825 Query 132034 AATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 | |||| ||| ||| | || | |||||| | | || ||||| | || | |||| Sbjct 254826 AGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAAAGTAATAGTTT 254885 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTG 132120 ||||||| | |||||| | ||||| || Sbjct 254886 TACCAGTTAAAGTTTTGACAAAAATTTG 254913 >seq1 Length=2713227 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| ||||||| |||| |||||||||||||| || || | || | |||| Sbjct 1439226 AAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCT 1439285 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | |||||||| | | |||||| | ||||||||||| || || ||||||||||| Sbjct 1439286 TCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 1439345 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 |||||| ||| | | || | ||||| | | |||||||| | || | ||| Sbjct 1439346 TGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGTT 1439405 Query 132092 TTACCAGTCAGAGTTTT 132108 ||||| || || ||||| Sbjct 1439406 TTACCTGTAAGGGTTTT 1439422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610777007560