Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq10 145 7e-30 seq4 143 2e-29 seq8 125 6e-24 seq1 118 9e-22 seq15 98.7 9e-16 >seq10 Length=718177 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | ||||| ||||| ||||| || ||| | || || | ||||| ||| | Sbjct 468215 AAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATCT 468156 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 |||||||| || | || ||| |||||| |||||||| ||||| || || ||| Sbjct 468155 TCTGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCAGAT 468096 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 || |||||| | |||| | || |||||| | ||||||| ||||| | ||||| Sbjct 468095 CAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTAT 468036 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||||||||||||||| || | |||||||| |||||||| ||||| || Sbjct 468035 AATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG 467986 >seq4 Length=1551466 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| ||||| || ||| | || || | ||||| ||| | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || ||| ||||||| |||||||| || || || || ||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| | ||| |||||| | ||||||| ||||| | ||||| ||| Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| || |||||||||| |||||||| ||||| || Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGG 1333329 Score = 122 bits (134), Expect = 8e-23 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| || || || ||| | || || | ||||| ||| | Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || || || ||| |||||||| ||||| || || ||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| | ||| |||||| | ||||||| ||||| | ||||| ||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 ||||||||||| || || |||||||||| | ||||| ||||| || || |||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGGTAATTGAT 1333093 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || ||||| || || | ||||| | ||||| ||| | Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || ||| |||||| |||||||| ||||| || || || || Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| | || |||||| | ||||| | ||||| | | || || ||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| || |||||||||| | ||||| ||||| || Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGTGG 1333557 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | || || || || ||||| || ||| | || || | ||||| ||| | Sbjct 1334015 CAAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATC 1333956 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 ||||| || || | || ||| ||| || |||||||| || || || || || Sbjct 1333955 ATCTGATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACCAGA 1333896 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| ||| | | || | || ||| || ||| | ||||||| ||||| | | || || Sbjct 1333895 TCAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTA 1333836 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| |||||||||||||| || |||||||||| |||||| | ||||| || Sbjct 1333835 CAACATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAGACTTAGAGGTGG 1333785 >seq8 Length=720923 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25178 CAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGAT 25237 ||| | ||||| ||||| ||||| || ||| | || || | ||||| ||| || ||| Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 25238 ACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAA 25297 ||||| || | || ||| ||||| |||||||| ||||| || || ||||| ||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACAA 254794 Query 25298 AGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATT 25357 | | |||| | || |||||| | ||||||| |||| | ||||| |||||| Sbjct 254793 CGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATATT 254734 Query 25358 CAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 ||||||||||| || |||||||||| | ||||| |||||||| || Sbjct 254733 CAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGGTAA 254687 >seq1 Length=2713227 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| ||||| | || || ||| | ||||| | ||||| ||| | ||||| || Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || ||| |||||| |||||||| ||||| || || ||||| |||||| | Sbjct 1439368 GATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTA 1439309 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAA 25363 || | | || |||||| | ||||||| |||| | | ||||| || ||||||||| Sbjct 1439308 ATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAA 1439249 Query 25364 GAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || | |||||||| |||||||| ||||| || Sbjct 1439248 GAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG 1439211 >seq15 Length=386167 Score = 98.7 bits (108), Expect = 9e-16 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 110044 TACACGTTTTTCGAAAAAATTAGTTTTGCCCTCGAGAGATATATTATTCATAAACTCGAA 110103 ||| | |||||| |||||||||||||| || | | ||| ||||| | |||||| || || Sbjct 129408 TACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAAAGAAATATTTTCCATAAAATCAAA 129349 Query 110104 AGGAT---TGACAGTGTTAAAGTGTTTGTCGTAGCCCAATTCGAATAGCAATCGATCCGC 110160 |||| | ||| | | ||| | ||| | || || || | | || |||| ||| || Sbjct 129348 TGGATTTGTAACATTATAAAATTTTTTAT--TA-CCTAAAGCAACTAATAATCTATCTGC 129292 Query 110161 CACAAATTCAATATACTCGCACATGGACTGTAC-GTTCATGCCTAACATGGCAACTGGTA 110219 |||||||||| ||| | ||||| | | ||| ||||| ||||| | | | | |||| Sbjct 129291 AACAAATTCAACATATTGACACAT-TAATTTACAATTCATACCTAATAAAGAAGCAGGTA 129233 Query 110220 GAGCGGTAGTaaaaaaaTCCTTTTCAATGTCGACAGCCTC 110259 ||| ||||||| |||| |||||||| || ||||| || Sbjct 129232 AAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTC 129193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094004978720