Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq10 134 1e-26 seq4 134 1e-26 seq8 107 2e-18 seq1 91.5 1e-13 >seq10 Length=718177 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 106253 TTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGA 106312 ||||||||||||||||||||||||||| || || || || || ||||| | ||| || Sbjct 468219 TTTAAAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGA 468160 Query 106313 ACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGT 106372 | | ||| || ||| | || ||| |||||| || |||||||| | || Sbjct 468159 ATCTTCTGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACC 468100 Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432 ||||||||||| | |||| ||| || ||||||||||||||| || ||| | || Sbjct 468099 AGATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGA 468040 Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| || || ||||||||||| || |||||||||| || || ||| |||| || Sbjct 468039 TTATAATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG 467986 >seq4 Length=1551466 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||||||||| || ||||| || ||||||||| ||||| ||| | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| ||||||| || |||||||| | || |||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| ||| || ||||||||||||||| || ||| | ||||| || Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || |||||||| || || ||| |||| || Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGG 1333329 Score = 118 bits (130), Expect = 9e-22 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||||||||| ||||| || || || ||||| | ||| ||| | Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || || || ||| || |||||||| | || ||||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| ||| || ||||||||||||||| || ||| | ||||| || Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAAT 106491 || |||||||| |||||||| |||||||| | || ||| |||| || |||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGG-TAAT 1333097 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || || ||||| ||||| || || | ||| |||| | Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| |||||| || |||||||| | || || ||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| ||| || |||||||||||||| || |||| || || || || Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || |||||||| | || ||| |||| || Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGTGG 1333557 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 106253 TTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGA 106312 ||| |||||||||||||| || || || || ||||| || |||||||| | ||| || Sbjct 1334018 TTTCAAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGA 1333959 Query 106313 ACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGT 106372 | | ||| | ||| | || ||| ||| || || |||||||| | || Sbjct 1333958 ATCATCTGATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACC 1333899 Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432 ||||||||| | | || | || || || |||||||||||| || |||| | || Sbjct 1333898 AGATCAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGA 1333839 Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 |||||||| ||||||||||| || || |||||||| || || Sbjct 1333838 CTACAACATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAG 1333797 >seq8 Length=720923 Score = 107 bits (118), Expect = 2e-18 Identities = 162/229 (71%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 106263 CAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGAT 106322 ||||||||||| ||||| || ||||| || || ||||| | ||| ||| || ||| Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 106323 TCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAA 106382 || ||| | || ||| ||||| || |||||||| | || ||||||||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACAA 254794 Query 106383 AGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATA 106442 | | |||| ||| || ||||||||||||||| | ||| | ||||| || || Sbjct 254793 CGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATATT 254734 Query 106443 CAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAAT 106491 ||||||||||| || || |||||||| | || ||| ||||||| |||| Sbjct 254733 CAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGG-TAAT 254686 >seq1 Length=2713227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 106344 AAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAA 106403 |||||| || |||||||| | || ||||||||||| | || | ||| || ||| Sbjct 1439353 AAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAA 1439294 Query 106404 CAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACAT 106463 |||||||||||| | |||| | ||||| ||||| ||||||||||| || ||||| Sbjct 1439293 CAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAAGAATCAACTTTACAT 1439234 Query 106464 TTAGTATTGAGGTTACGAGGAGG 106486 ||||| || || ||| |||| || Sbjct 1439233 TTAGTTTTAAGATTAAGAGGTGG 1439211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329251859168