Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 141 9e-29 seq10 122 9e-23 seq8 116 4e-21 seq1 91.5 1e-13 >seq4 Length=1551466 Score = 141 bits (156), Expect = 9e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| |||| || || | || || || ||||| ||||||||||||||||| | Sbjct 1333785 CCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAT 1333844 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || || || || ||||| || ||||| || || Sbjct 1333845 AAAGTTCTACCA-TCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGG 1333903 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||| || ||| ||| || || | ||| || || ||||| || Sbjct 1333904 AATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAAC 1333963 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | ||||||||||||||| |||||||| || |||||||||||||||||| Sbjct 1333964 TTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 1334015 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || || || | || || || ||||| |||||||| || || || Sbjct 1333329 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAT 1333388 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||||| || |||||||||||||| || ||||| || || Sbjct 1333389 AAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGA 1333448 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| |||||||||||| ||| || || | || || || ||||| || Sbjct 1333449 ATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACT 1333508 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||||||||| |||||||||||||| || |||||||| Sbjct 1333509 TCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 || || || ||||| |||||||| || ||||| | ||| | | | | ||| || | || Sbjct 1333581 TGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCT-ACCGTCTTCTAATTG 1333639 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || |||||||| ||||| || || || || || || |||||||| ||||||||||| Sbjct 1333640 TTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATTTT 1333699 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | || || || ||||| || || | ||| || || ||||| || Sbjct 1333700 ACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGATTGTCTTACCAGT 1333759 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || || ||||||||||| Sbjct 1333760 TAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||||| || |||||||||||||| || ||||| || || || |||||||| |||||||| Sbjct 1333182 TGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATC 1333241 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || || | || || || ||||| || || | |||||| |||||||| Sbjct 1333242 TTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAATTGTTTTACCT 1333301 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||||||||| ||||||||||| Sbjct 1333302 GTCAAAGTTTTAACAAAAATTTGCAT 1333327 >seq10 Length=718177 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || || || | |||| || ||||| |||||||| || || || | Sbjct 467986 CCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGAT 468045 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||| || |||||||| || | || ||||| || || Sbjct 468046 AATGTTCTACCA-TCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGG 468104 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||||||||| ||| || || | || || || ||||| || Sbjct 468105 AATACCTTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAAC 468164 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | |||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct 468165 TTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTT 468215 >seq8 Length=720923 Score = 116 bits (128), Expect = 4e-21 Identities = 171/238 (72%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 || |||||||| | || | || | || || || ||||| |||||||| || || || Sbjct 254687 TTACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCA 254746 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | || | | | | || || | ||||| || |||||||||||||| || ||||| || Sbjct 254747 GATAAGGTTCTTCCA-TCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGG 254805 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || || |||||||| |||| ||||| ||| || || | || || || ||||| Sbjct 254806 TGGAATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTC 254865 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720 || || | |||||| |||||||| ||||||||||| || |||||||| ||| | ||| Sbjct 254866 AACTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG-ATTATATTT 254922 >seq1 Length=2713227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || || || | |||| || ||||| ||||||||||| || || | Sbjct 1439211 CCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGAT 1439270 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||| || ||||| || || | || ||||| || || Sbjct 1439271 AAAGTTCTTCCA-TCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGG 1439329 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||||||||| ||| || || | || || || |||||||| Sbjct 1439330 GATACCTTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCAC 1439389 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 || | ||| || |||||||| || | |||||||| || Sbjct 1439390 TTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397951458920