Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq15 381 5e-101 seq1 235 4e-57 seq3 87.8 1e-12 seq2 87.8 1e-12 seq4 82.4 6e-11 >seq15 Length=386167 Score = 381 bits (422), Expect = 5e-101 Identities = 607/864 (70%), Gaps = 15/864 (2%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | ||||||||| |||||||||| || ||||||||||| |||||||| | || Sbjct 128545 TTTGTTTTATTTCCAATTAAATATCATGAAATTTGGCAAATGTATAAAAAAGCTGAAGCT 128604 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG--CAT 43817 ||||||||||| ||||||||| ||||||| | |||||| ||| |||||| | | | Sbjct 128605 TCATTTTGGACTGCAGAAGAAATTGATTTAAGTAAAGATTTACATGATTGGAATAATCGT 128664 Query 43818 TAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGAC 43876 | ||| | || |||| | |||||| || ||||| || |||||||| || || Sbjct 128665 TTAAATAAAAATGAAAGATTTTTTATTTCAAGAGTTTTAGCATTTTTTGCAGCTTCTGAT 128724 Query 43877 GGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCA 43936 || || || ||||||||||| ||| ||| | |||||||||| | || ||||| Sbjct 128725 GGTATTGTTAATGAAAATTTAGTTGAAAATTTTTCTGCAGAAGTTCAAATTCCTGAAGCT 128784 Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996 |||||||||||| ||||||||| || |||||||||||||| |||| || | | Sbjct 128785 AAATGTTTTTATGGTTTTCAAATTATGATGGAAAATATTCATTCTGAAACTTATTCTTTA 128844 Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056 | ||||||| || || |||||| | || || | || |||||||| || ||| Sbjct 128845 TTATTAGATACTTATATTAAAGATCCAAAAGAAAATAAATTTTTATTTAATGCAATTGAA 128904 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116 ||| | || |||||||| ||||| || ||||| | | |||||| ||| |||||| Sbjct 128905 ACAATTCCATGTATTAAACAAAAAGCTGAATGGGCTTTAAGATGGATTAATGATAATGAT 128964 Query 44117 TCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 |||| || ||| || | || || ||||| | ||| ||||| |||||||| || ||| Sbjct 128965 GCTTTATATGCTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGA 129024 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || ||||| | |||||||||||||| ||| ||||||| ||||| || || || |||||| Sbjct 129025 TCTTTTGCTTCAATATTTTGGTTAAAAAAAAGAGGTTTAATGCCAGGTTTAACATTTTCA 129084 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 ||||| ||||| || | |||||||| | ||| ||||||||||| || ||| || Sbjct 129085 AATGAATTAATTTGTAGAGATGAAGGTCTTCATACTGATTTTGCTTGTTTATTATTT--- 129141 Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAATTACAGATATTGTTGTAGAGGCA 44350 | || | |||| || | ||| || | || | | ||| || || || Sbjct 129142 TCTCATTTAATTAATAAACCAAATCCAT-TA--ATTGTTCAAAAAATTATTACTGAAGCT 129198 Query 44351 GTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAAT 44410 || | || ||| |||| | | | || || ||||||| |||| |||| |||||| Sbjct 129199 GTTGATATTGAAAAAGATTATTTTACTGATGCTTTACCTGCTTCTTTATTAGGTATGAAT 129258 Query 44411 GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGT 44470 || ||| |||||| |||||| |||||||| | ||| | | | | ||| Sbjct 129259 TGTAAATTAATGTGTCAATATGTTGAATTTGTTGCAGATAGATTATTAGTTGCTTTAGGT 129318 Query 44471 TGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530 | ||| |||| ||| ||| || ||||||||||||||||||||||| || | Sbjct 129319 AATAAAAAATTTTATAATGTTACAAATCCATTTGATTTTATGGAAAATATTTCTTTAGCT 129378 Query 44531 GGCAAAACAAACTTTTTTGAAAAA 44554 || ||||| || |||||||||||| Sbjct 129379 GGTAAAACTAATTTTTTTGAAAAA 129402 >seq1 Length=2713227 Score = 235 bits (260), Expect = 4e-57 Identities = 473/695 (68%), Gaps = 20/695 (3%) Strand=Plus/Plus Query 19232 AAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTG 19291 |||| ||| ||||| || || ||| || ||| || |||| ||| | ||||| |||| Sbjct 477968 AAGAAATGGGTATTGGTGGTTTAGATAATGAATTTACTCAAATTTTTAGAAGAGCTTTTG 478027 Query 19292 TGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAA-CATGTTCGTGGA 19350 | ||||| | ||| | | ||| || |||| || | ||| |||||| || Sbjct 478028 CAAGTAGAATTTTTCCACCAGGTTTAATTGAAAAATTAGG-TATAACTCATGTTAAAGGT 478086 Query 19351 CTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAA 19410 | || | ||||| || || ||| ||||||||| |||||||| ||| || || ||||| Sbjct 478087 ATGTTATTATATGGTCCTCCAGGTACTGGAAAAACTTTAATTGCAAGAAAAATTGGTAAA 478146 Query 19411 ---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATAT 19467 ||| | |||| |||| |||||||| |||||||| ||||| |||| ||||||| Sbjct 478147 ATGTTAAATGCAAATGAACCA---AAAATTGTTAATGGTCCAGAAATTTTAAGTAAATAT 478203 Query 19468 GTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527 || || || ||||||||| | || ||| ||| || |||||||| ||| | ||| Sbjct 478204 GTTGGATCTTCTGAAGAAAATATTAGAGCTTTATTTAAAGATGCTGAAGATGAATATAAA 478263 Query 19528 CGTTTAGGGCGCAAAAGTTC---TTTGCACATTATAATACTAGATGAATTGGACGCAATC 19584 ||| | | || || ||| || ||||| || | |||||||| || | | Sbjct 478264 TCAAAAGGT-GAAGAA--TCAAGTTTACATATTATTATTTTTGATGAATTAGATTCTGTT 478320 Query 19585 TGTAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAA 19638 | ||| ||||||||||| || || | ||| || ||| | |||||| |||||| Sbjct 478321 TTTAAACAAAGAGGTTCAAGAGGTGATGGTACTGGTGTTGCTGATAATGTTGTTAATCAA 478380 Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698 | | ||||| | || |||||| | ||| | |||||||||||||| ||||| |||||| Sbjct 478381 TTATTAGCAAAAATGGATGGTGTTGATCAATTAAATAATATTTTAGTCATTGGTATGACT 478440 Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758 |||||| || ||||| || | || |||||| |||| ||| | || ||| | | | Sbjct 478441 AATAGAAAAGATTTAATTGATAATGCTTTATTAAGACCTGGTAGATTTGAAGTTCAAGTT 478500 Query 19759 GAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACC 19818 |||||| ||||| |||||| ||| | ||||| | || |||||| || Sbjct 478501 GAAATTTCTTTACCTGATGAAAATGGTAGAAAACAAATTCTTTTAATTCATACAAAAAAA 478560 Query 19819 ATGCGACAAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACC 19878 ||| || | ||||| | | ||| | ||||| || | | ||||||||||| || Sbjct 478561 ATGAGAGATAATAATATGCTTAATAAAGATGTTAATATTAATGAAATTGCAGCTTTAACA 478620 Query 19879 AAAAACTATAGCGGCGCAGAACTTGAGGGATTAGT 19913 ||||| | ||| || |||||| |||| || ||||| Sbjct 478621 AAAAATTTTAGTGGTGCAGAAATTGAAGGTTTAGT 478655 >seq3 Length=2066014 Score = 87.8 bits (96), Expect = 1e-12 Identities = 206/305 (68%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 47228 TTAGGACTTTATGAAA-AATCAGGGAAAATA-TTATTTCTCGGGTTAGACAATGCAGGAA 47285 ||||| |||||| || || || || |||| ||||| | || ||||| ||||| || | Sbjct 1864229 TTAGG--TTTATGGAATAAACATGGTAAATTGTTATTCTTAGGTTTAGATAATGCTGGTA 1864172 Query 47286 AAACGGCATTACTCCACATGCTCAAATACAATTGCAT-GAAAGAGCATAACCCTACATTA 47344 |||| | ||| | || ||| | ||| | || | | | || | |||| || ||| Sbjct 1864171 AAACAACTTTATTACATATGTTAAAAAATGATAGATTAGCAACTTTACAACCA-ACTTTA 1864113 Query 47345 CATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCACATTTGATTTAGGA 47404 ||||| || |||| || || | |||| | || | ||||| || ||||||||||| Sbjct 1864112 CATCCAACAAGTGAAGAATTAGCTATTGGTAATATTAGATTTACAACTTTTGATTTAGGT 1864053 Query 47405 GGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGTTGATGCTATAGTT 47464 || || ||||| | ||| | ||| || ||||||||| || ||| ||| ||| ||| Sbjct 1864052 GGTCATCAACAAGCTAGAAGATTATGGAAAGATTATTTTCCTGAAGTTAATGGTATTGTT 1863993 Query 47465 TATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAATCGAATTCGATGCG 47524 | | | || || ||| ||| || ||| | ||| |||||| ||||| ||||| Sbjct 1863992 TTTTTAGTTGATGCTGCTGATATGGAAAGATTTCAAGAATCAAAAACTGAATTAGATGCT 1863933 Query 47525 TTGTT 47529 || || Sbjct 1863932 TTATT 1863928 >seq2 Length=2503681 Score = 87.8 bits (96), Expect = 1e-12 Identities = 482/764 (63%), Gaps = 44/764 (6%) Strand=Plus/Plus Query 40678 ATTTGAGAAATCAG---TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTG 40734 ||||||| ||| | ||||| || |||| || |||| | | |||| |||| ||| Sbjct 1553190 ATTTGAGCAATGATGTATTTCCATTATTAACAACTAAAAGAGTATTTTTAAAAGCTATTA 1553249 Query 40735 CAGAAGAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAG 40794 | ||| | || ||||| || | || ||||| ||| | ||| | || |||| || Sbjct 1553250 TTCATGAATTATTGTGGTTCATAAGCGGATGTACAGATGGTGCTAAACTTTCTGAAAAAG 1553309 Query 40795 GAGTGCACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGA-TTACAA 40853 |||| | || ||| ||| | | | |||| || || | | ||| ||||| Sbjct 1553310 GAGTTAAAATATGGGATGGGAATGGCTCTAGGGAGTACTTAGATTCGGTGGGACTTACAG 1553369 Query 40854 GATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCA 40913 || | || | |||||||||||||||||| ||||| ||||| | | |||||||||| || Sbjct 1553370 GAAACAGA-GTAGGTGATCTTGGTCCTGTGTATGGGTTTCAATGGAGACATTTTGGTGCG 1553428 Query 40914 AAATATG-ACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATT-ACAGTGCG 40971 ||||||| | || || | | ||||| || || ||||||| || ||| | Sbjct 1553429 AAATATGAAGGCTGTG-ATGCAAATTATGATGGAAAGGGTGTGGATCAGTTGGCAG-AAG 1553486 Query 40972 TTATAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACC 41031 |||| | | | |||| || |||| || ||| | ||||| ||| || ||||||| Sbjct 1553487 TTATTAAAAAGCTTAAGACCAATCCATATGATCGAAGAATAATCATGTCAGCTTGGAACC 1553546 Query 41032 CAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACG--- 41088 | | || | ||||| || || ||||||||| | || | ||| ||||| | Sbjct 1553547 CTGCTGATTTTTCAAAAATGGCTTTACCTCCTTGTCATATTTTTTCTCAATTTTATGTAA 1553606 Query 41089 --TTTGCAATGGTG------AACT-------------GTCA---------TGTCAATTGT 41118 ||| ||| | | || | | || ||| ||| | Sbjct 1553607 ATTTTCCAAGCGAGGAAGAAAAATCGAAAGGATCTAAGCCAAAATTAAATTGTTTATTAT 1553666 Query 41119 ATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGC 41178 |||||||||| | || |||||| |||| || || ||||| || || |||||| | Sbjct 1553667 ATCAAAGATCTTGCGATATGGGATTAGGAGTACCCTTTAATATTGCTTCTTATGCGTTAT 1553726 Query 41179 TCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAG 41238 | || | ||||| || ||| |||| | | ||| || | || || |||| Sbjct 1553727 TAACAAAAATGATAGCCATGGTTTGCAATATGGATTGTGGCTCCTTCATCCATACATTAG 1553786 Query 41239 GAGATGGACATATTTACATTAATCACATAGA-GCCGTTAACAGAACAACTGACACGAAAA 41297 |||||| ||| | |||| | |||| || || || |||| | |||| | | || || Sbjct 1553787 GAGATGCCCATGTATACAATGATCATATTGATGCTCTTAA-ACAACAGATTCAAAGAGAA 1553845 Query 41298 CCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTTGC 41357 || ||| ||||||| | || ||||| ||||| | || |||||||||||| Sbjct 1553846 CCAAGATGCTTTCCAAAATTGAACATCAAACGAACTGTTACCGATATCGATGATTTTTGC 1553905 Query 41358 ATCGATGATTTTGTCGTTTGCGATTACAATCCGTACCCTAAAAT 41401 | |||||||||| | |||||||||| || || ||||| Sbjct 1553906 TTTGATGATTTTGAATTGATAAATTACAATCCTTATCCCAAAAT 1553949 >seq4 Length=1551466 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 115035 GTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTCGGCT 115094 |||||||| ||||||| |||||| ||||||||||| || || || | || || || || Sbjct 127505 GTCATACGAGAAGGAATAGCATGTGGATTAATAATTAAATCCGGAATTATTCCTTCCGCA 127446 Query 115095 GTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCGGTAAAC 115154 ||||| ||||| || | || || | || || |||||||||||| | | Sbjct 127445 GTGAATGGCATATCTTCATGTCTATATGTTATACCTATAGTTCCTTTTTGCCCATGACGA 127386 Query 115155 GATGCAAATTTATCACCAAT 115174 |||||||||||||| ||||| Sbjct 127385 GATGCAAATTTATCTCCAAT 127366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455656076355