Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq8 114 1e-20 seq4 113 4e-20 seq10 102 7e-17 >seq8 Length=720923 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 || ||||| | || || |||||||||||||| || || | | | ||| | | ||||| Sbjct 254708 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTTC-CATCTTC 254766 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | |||||||| || |||| | ||| |||||||| || || | ||| |||||||| Sbjct 254767 TAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTA 254826 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || |||| | | | || | ||| || | || ||||||||||| ||| |||| ||| Sbjct 254827 GATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAAAGTAATAGTTTT 254886 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTG 27244 || || | |||||| ||||| ||||| Sbjct 254887 ACCAGTTAAAGTTTTGACAAAAATTTG 254913 >seq4 Length=1551466 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 || ||||| | ||||| |||||||||||||| || || | | | ||| | | ||||| Sbjct 1333119 ACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTAC-CATCTTC 1333177 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||||| ||||| |||| | ||| |||||||| || || | ||| |||||||| Sbjct 1333178 TAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTTATCTTG 1333237 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | ||| || | | ||||||||||| ||| || | ||| Sbjct 1333238 AATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAATTGTTTT 1333297 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| |||||| ||||| ||||||||| Sbjct 1333298 ACCTGTCAAAGTTTTAACAAAAATTTGCATA 1333328 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTC 27094 || || ||||| | || || ||||||||||| |||||||| | | | ||| | | || Sbjct 1333800 AAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTAC-CATC 1333858 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | || ||||||||| | || | ||| |||||||| || || | || |||||||| Sbjct 1333859 TTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATC 1333918 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| ||| | | || | || || | | ||||||||||| ||| || | Sbjct 1333919 TTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTAATGGT 1333978 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || || | ||| || || || |||||||| Sbjct 1333979 TTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 1334011 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTC 27094 || || ||||| | || || |||||||||||||| || || | | | ||| | | || Sbjct 1333344 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTAC-CATC 1333402 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | ||||| ||||| |||| | ||| |||||||| || || | || |||||||| Sbjct 1333403 TTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATC 1333462 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 || || ||| | | || | ||| || | | ||||||||| | || || | Sbjct 1333463 TTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGT 1333522 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || || | |||||| ||||||||||||||| Sbjct 1333523 TTTACCAGTTAAAGTTTTAACAAAGATTTGCATA 1333556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || |||||||||||||| ||||| || | | ||||||| Sbjct 1333575 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACCGTCTTCT 1333634 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| || |||| | ||| ||||| || || || | ||| |||||||| Sbjct 1333635 AATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGA 1333694 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | | || | ||| |||| | ||| ||||||| ||| || | || Sbjct 1333695 ATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGATTGTCTTA 1333754 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || | || || ||||| ||||||||| Sbjct 1333755 CCAGTTAAGGTCTTGACAAAAATTTGCATA 1333784 >seq10 Length=718177 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTC 27094 || || |||||||| || || |||||||||||||| || || | | ||||| | | || Sbjct 468001 AAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTAC-CATC 468059 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | |||||||| || |||| | | |||||||| || || | ||| |||||||| Sbjct 468060 TTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATC 468119 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 || || |||| | | || | ||| || | | ||||||||||| ||| || | Sbjct 468120 TTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGT 468179 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || || | ||||| ||||| |||||||| Sbjct 468180 TTTACCTGTTAAGGTTTTAACAAAAATTTGCAT 468212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934032298952