Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=2066014 Score = 107 bits (118), Expect = 2e-18 Identities = 648/1033 (63%), Gaps = 13/1033 (1%) Strand=Plus/Plus Query 110969 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 111028 |||||||| || ||||| || || || ||||| || ||||| |||||||| Sbjct 1414017 GCGTGATAAATTGTTTCGAAAATTTGAATATTCAAAATTTTAGCTTCTGAAGAATCAAAA 1414076 Query 111029 GCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTG 111088 | | | ||| |||||| ||| || | |||||||||||| ||| |||| || || Sbjct 1414077 GGTAATCTTAACATCATAAATGTATCTGCTAAACCTTGAACACCTAAAGCAATTGGCCTA 1414136 Query 111089 TGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCG 111147 | | ||||||||| || || ||| ||| |||||||| || | ||||| || || Sbjct 1414137 TTTTTCATATTAGATCTTTTTGCT-TCTGGAACTGGATAAAAGTTACGATCAATAACGCG 1414195 Query 111148 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG 111207 | |||||| | || | || || | |||||||| | ||| ||| ||||| | | Sbjct 1414196 ATCAAGATTTCTTGTTAAAACTTTGGCTATTTCATGCAATTTATCAAAATCATACCAACA 1414255 Query 111208 AGTCTCTTCAT-----TGA-CATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 111261 | | | |||| ||| || | ||||||||| | || || ||||| |||||||| Sbjct 1414256 ACTATGATCATCTTGTTGAACAAATGCTGGAAGGGCAAGAGAAGCTAAATTACAAACAGC 1414315 Query 111262 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGT 111321 || || | ||||| ||||| | ||||| || | || ||| || ||| Sbjct 1414316 AGTTTCTTGGGCATCTGAATACTCAACTATTTCACAGCAAAGATTAGAAGATTTGATCAC 1414375 Query 111322 CCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 111381 || | ||||||||| ||||| || || ||||| ||||| || || | |||| | || || Sbjct 1414376 ACCAAGATTCTTTTGATTACTTTTTTTATTGCAAGCATCTTTATAAACCATGAAAGGAGT 1414435 Query 111382 CCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGG 111440 || | || || || | || | ||| || ||| ||| | | | || |||| Sbjct 1414436 ACCGGATTCAGTTTGAGCTTCTAAAATTGCAGACCATAACTTTTGAG-CTTTAACAACTT 1414494 Query 111441 CGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG 111500 | || || | || || | | || |||||| || || || Sbjct 1414495 TTATAGCTTTCCCATTTTTTTCATAGGATTCAAATAGTTTTTCAAATTCATCTCCATAAC 1414554 Query 111501 CGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAA 111560 || | ||| || | | | |||| | || | | ||| | | || |||| Sbjct 1414555 AATCACTTAAACCAGGAACTTCATTTGGAGAAAATAATGGCCAATCAAGGTTTTTTTCAA 1414614 Query 111561 CCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCT 111620 | | ||||| || | || || ||||| || | | ||| | |||||| | | || Sbjct 1414615 CTCTTTTCATAAATAAATCCGGGATCCAAAGAGCAGGAAATAAATCTCTTGCTCTAATCT 1414674 Query 111621 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 111680 |||| | ||| || || || | |||| || || | || || || |||||||| | Sbjct 1414675 CTTCTTTACCATGATTTTTTCTAATATCAATAAAATCAAAAATGTCAGCATGCCATGGTT 1414734 Query 111681 CAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTG 111737 ||||||||| ||| | | || || | ||| |||||| ||||| | || | Sbjct 1414735 CAAGATAGATTGCAAAGGCACCAGGACGTTTATTACCACCTTGATCAACATATCTTGCAG 1414794 Query 111738 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 111797 | || ||||| | | |||||| |||||||||| || |||||| || || || Sbjct 1414795 TCATATTGAATACTCTTAACATTGGGATAATACCATTGGAAGTACCATTAGTACCTGCAA 1414854 Query 111798 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 111857 || || | ||||| | || ||| || || | || ||||| ||||| |||| Sbjct 1414855 TATATGAACCGGTTGCTCTGATATTATGAATATGTAAACCTATACCACCAGCATGTTTTG 1414914 Query 111858 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 111917 | || || || | | ||| | | ||||| || ||||| || ||||| | | Sbjct 1414915 AAATAACGGCCATTTCAGACAAAGTATCGAATATACCATTTATTGAATCATCCTTCATTG 1414974 Query 111918 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 111977 | | ||| || ||| ||||| ||||| |||| || ||||||||||| | ||||| | Sbjct 1414975 CAACAAGAAAACAAGAAGACATTTGCGGCTTTGGAGTTCCAGCATTGAATAATGTTGGAG 1415034 Query 111978 TTGCGTGAATGAA 111990 || ||| |||| Sbjct 1415035 AAGCATGAGTGAA 1415047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031442621600