Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 102 1e-16 >seq3 Length=2066014 Score = 102 bits (112), Expect = 1e-16 Identities = 243/362 (67%), Gaps = 8/362 (2%) Strand=Plus/Minus Query 104907 CTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 104966 ||||||| || | ||||| || | |||| |||| ||||| || || || |||| |||| Sbjct 1414452 CTCAAACTGAATCCGGTACTCCTTTCATGGTTTATAAAGATGCTTGCAATAAAAAAAGTA 1414393 Query 104967 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTA 105026 ||||||||||| | ||||||||||| ||| ||||| || ||||| | || | | Sbjct 1414392 ATCAAAAGAATCTTGGTGTGATCAAATCTTCTAATCTTTGCTGTGAAATAGTTGAGTATT 1414333 Query 105027 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 105086 |||| | || || ||||| ||||| | || || | || || || | ||| Sbjct 1414332 CAGATGCCCAAGAAACTGCTGTTTGTAATTTAGCTTCTCTTGCCCTTCCAGCATTTGTTC 1414273 Query 105087 ATCCAGA-GA-CAAAGACATT----TGATTATGAAAAACTCCACGAAGTTACGAAAACTG 105140 | | ||| || || || || ||||| ||| ||| | || ||| | | ||| | Sbjct 1414272 AACAAGATGATCATAGTTGTTGGTATGATTTTGATAAATTGCATGAAATAGCCAAAGTTT 1414213 Query 105141 TCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGT 105199 | || | ||| || | | ||||||||| | || ||||| || ||| ||| || Sbjct 1414212 TAACAAGAAATCTTGATCGCGTTATTGATCGTAACTTTTATCCAGTTCCAGA-AGCAAAA 1414154 Query 105200 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTC 105259 | ||||||||||| | | | ||||||| | | |||||||| ||| | || ||| ||| Sbjct 1414153 AGATCTAATATGAAAAATAGGCCAATTGCTTTAGGTGTTCAAGGTTTAGCAGATACATTT 1414094 Query 105260 AT 105261 || Sbjct 1414093 AT 1414092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260282356040