Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq13 143 1e-29 >seq13 Length=441995 Score = 143 bits (158), Expect = 1e-29 Identities = 334/493 (68%), Gaps = 13/493 (3%) Strand=Plus/Plus Query 64892 CCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAAAG 64951 || || || ||||| | | ||||| | ||||||||| || | |||||| ||||| | Sbjct 83664 CCAGTTCCTATACCTTCCGCACCATTAACTAAAATCATTGGTAAAATTGGCGCATACCAC 83723 Query 64952 ATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAATGGCATCATCCTCTTTT 65011 || |||| | | |||||| || ||||| || || | | |||||| | Sbjct 83724 TCTGGTTCAATAGTTTTACCATCTTCGGGTAAATAATTAAACAAAGGATCATCATGAGGA 83783 Query 65012 GGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGG 65071 | |||||||| | ||||||||||| | || ||| ||||||||||| | | ||| Sbjct 83784 TGGAATATAGATCTGGTTATTTTATTAAGTTTTGTAAAAATATATCTTGCAGCTGCAGCA 83843 Query 65072 TCTTGTCCAGTTC--GTCGT-GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTG 65128 |||| ||| | | | | | || || |||||| ||| ||| | || |||||| Sbjct 83844 TCTTTACCACCACAAGCCCTAGAACCGAAGGCACCATTGGGCTCTAAAAGATAAATATTA 83903 Query 65129 TTTGAACCAATAAAATTCTGAGCCATTCCGATAATTG-CTGCAT--TTAAACTCGCTTCA 65185 |||||||||| |||| | ||||||||||||||||||| |||||| || || || ||| Sbjct 83904 TTTGAACCAACAAAACTTTGAGCCATTCCGATAATTGTCTGCATCATTGAA---GCATCA 83960 Query 65186 CCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCC 65245 || |||||||| | | ||| || ||| | || |||| || |||||| |||| Sbjct 83961 CCATGATGATAACTAGCATGACCATTAACAAAACCTTGTAATTCAGAAACTTTCTTTTCA 84020 Query 65246 GTTGTTAAATTCT-TTTTAAATGCAGAATACAATA-TTTTCCGTAAACTAATTTTCAATC 65303 ||| |||| || | |||| || || |||||| | |||| | ||| | ||| |||| Sbjct 84021 GTT-TTAAGTTTTGTTTTGAAATAAGTATACAAAACCTTTCTTTGAAC-AGGTTTAAATC 84078 Query 65304 CATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTCTT 65363 ||||||| | | ||||| ||| ||||||| | || || || ||||||| Sbjct 84079 CATCCATCATAGAGGGAATAGATCTTGCACAATCTGCAATAGAAAATAAAATCAATTCTT 84138 Query 65364 TGTTAATAAATTC 65376 | || ||||| || Sbjct 84139 TATTGATAAACTC 84151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679796063150