Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4 143 3e-29 seq8 131 2e-25 seq10 123 3e-23 seq1 102 9e-17 >seq4 Length=1551466 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | || || ||||| || ||| | || || || || Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || ||||||||| || || || || |||||||||||||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||||||||||||||| ||| | || || | | | || | | ||||||||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | ||||| ||||| ||||||||| |||| Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGT 1333575 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || | || || || || ||||| | || ||||| ||| | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || | |||||||| || || || |||||||| ||||| || Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | |||||||| || || ||| | || |||| | | ||| || | || |||||| Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | ||||| ||||| ||||||||| |||| || Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTT 1333344 >seq8 Length=720923 Score = 131 bits (144), Expect = 2e-25 Identities = 161/219 (74%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455 ||| | |||||| ||||| |||||||| || | || || || ||||||||| | || || Sbjct 254925 TATAAATATAAT-CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGT 254867 Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515 ||| || ||||| |||| || | || |||||| | || || || || ||||| Sbjct 254866 TGAATCCTCTGATACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCC 254807 Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575 ||||| || || ||| | |||||||||||||| ||| | || |||| | ||| || | Sbjct 254806 ACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATC 254747 Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 || |||||| | ||||| ||||| ||||||||| |||| Sbjct 254746 TGATTATAATATTCAAAAAGAATCAACTCTTCATTTAGT 254708 >seq10 Length=718177 Score = 123 bits (136), Expect = 3e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || | || || || || |||||| | || ||||| || Sbjct 468213 AATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATCTTC 468154 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| ||| | || ||||||||| || || || || ||||| ||||| || Sbjct 468153 TGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCA 468094 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | |||||||||||||||| ||| | || |||| | | || || | || ||||| Sbjct 468093 ACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTATAA 468034 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | | ||||| ||||| ||| | ||| |||| || Sbjct 468033 TATTCAAAAAGAATCAACTTTACATTTAGTTTT 468001 >seq1 Length=2713227 Score = 102 bits (112), Expect = 9e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||| || || ||||| || || ||||| ||| | || || || || ||||| ||| Sbjct 1439429 CTTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCAT 1439370 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | || | |||||||| || || || || || || ||||| || || | | Sbjct 1439369 TGATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATT 1439310 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 ||| ||||||||||| ||| | || |||| | || || | || ||||| | ||||| Sbjct 1439309 AATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAA 1439250 Query 27594 GGAATCCACTCTTCATCTAGTCTT 27617 ||||| ||| | ||| |||| || Sbjct 1439249 AGAATCAACTTTACATTTAGTTTT 1439226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309893849520