Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4 120 2e-22 seq1 86.0 4e-12 >seq4 Length=1551466 Score = 120 bits (132), Expect = 2e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||||||| | || || ||||| ||||| || ||||||||||| || || || Sbjct 1333785 CCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAT 1333844 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||| |||||||| || |||||||| ||||| || || || Sbjct 1333845 AAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGA 1333904 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||| || || ||| |||| |||| |||||| || |||||| || || || Sbjct 1333905 ATTCCTTCTTTATCTTGGATC-TTTGATTTAACATTATCAATTGTATCAGATGATTCAAC 1333963 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 ||| | || || |||||||| ||||| || || || ||||| ||||| |||| Sbjct 1333964 TTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTGA 1334016 >seq1 Length=2713227 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || ||||| | ||| || ||||||||||||||||| || | |||| | ||| Sbjct 1439226 AAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCT 1439285 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||| ||||| ||||| | ||||| || || || | || || || ||| Sbjct 1439286 TCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 1439345 Query 34615 GTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| ||| | |||||| || ||| || || |||||||| | || || || Sbjct 1439346 -TGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGT 1439404 Query 34674 TTTACCGGTTAACGTTTTCACAAA 34697 |||||| || | ||||| ||||| Sbjct 1439405 TTTACCTGTAAGGGTTTTAACAAA 1439428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729327660543