Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 seq1 132 4e-26 seq10 131 1e-25 >seq4 Length=1551466 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| | || || || | ||||| | ||||| ||| | || Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||| |||||||| || ||||| |||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||||| |||||||| ||||| || ||| | || ||||| || Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | ||||| ||||| | || | ||||| || Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGGTAT 1333326 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| | || || || | |||||| | ||||| ||| | || Sbjct 1334011 ATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCATCT 1333952 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||| || ||||| |||||||| || ||||| |||||| Sbjct 1333951 GATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACCAGATCAA 1333892 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | |||||| || ||||| ||||| || || | || || |||||| Sbjct 1333891 CAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 1333832 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||||||| || || || | ||||| || || Sbjct 1333831 ATTCAAAAAGAATCAACTCTTCATTTAGTCTT 1333800 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || | || || ||| | || ||| | ||||| ||| | || Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| ||||||||||| |||||||| || || || || ||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | || || |||||||| |||||| || || | || || || || Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||| || || || | ||||| ||| Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGTT 1333574 >seq1 Length=2713227 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| ||||| || || || || |||| ||| | ||||||||| | || || | ||| Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | || ||| ||||||||||| |||||||| || ||||| |||||||| | ||| Sbjct 1439368 GATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTA 1439309 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || |||||||| ||||| | || | || ||||| ||||||||||| Sbjct 1439308 ATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAA 1439249 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || |||||||| ||||| | || | ||||| || Sbjct 1439248 GAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGGTAT 1439208 >seq10 Length=718177 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| | || || || | |||||| | ||||| ||| | || Sbjct 468212 ATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 468153 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||| |||||||| || ||||| |||||| Sbjct 468152 GATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 468093 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || |||||||| ||||| || || | || ||||| || Sbjct 468092 CAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTATAAT 468033 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||||||| || || || |||||||| ||||| Sbjct 468032 ATTCAAAAAGAATCAACTTTACATTTAGTTTT 468001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918014009920