Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 3e-14 seq8 87.8 1e-12 seq10 84.2 2e-11 >seq4 Length=1551466 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||| |||||| | ||||| ||| ||||| | || || ||| | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| |||||| || |||||||| |||| || | Sbjct 1333495 GATACTATTGATAAT--GTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATC 1333438 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || |||||||||||||||||||| || || | | | ||| || ||||| | Sbjct 1333437 AACAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATA 1333378 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 | || |||||||| ||| | ||||| ||||| Sbjct 1333377 ATATTCAAAAAGAATCAACTCTTCATTTAGTTTT 1333344 >seq8 Length=720923 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 27793 CAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCG-- 27850 ||||||||||| |||||| | ||||| ||| |||||| | || || ||| | | | Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 27851 ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGC 27910 || || | || || ||| ||||| || ||||||||| |||| || || | Sbjct 254853 ACTATTGATAA--CGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAAC 254796 Query 27911 AACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACA 27970 |||| || |||||||| || |||||||| || || | | | | ||| || ||||| || | Sbjct 254795 AACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATA 254736 Query 27971 TCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 | |||||||| ||| | ||||| ||| Sbjct 254735 TTCAAAAAGAATCAACTCTTCATTTAGTT 254707 >seq10 Length=718177 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 ||||||||||||||||| ||||| | || || ||| ||||| | || || ||| Sbjct 468215 AAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATCT 468156 Query 27847 ACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | || | || | ||| || ||| ||||| || ||||||||| |||| | Sbjct 468155 TCTGATACTATTGATAAT--GTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCAG 468098 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||| | ||||||||||| || |||||||| || || | | | || || |||| Sbjct 468097 ATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGATT 468038 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 | || || |||||||| ||||| ||||| ||||| Sbjct 468037 ATAATATTCAAAAAGAATCAACTTTACATTTAGTTTT 468001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862092067817