Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq10 165 6e-36 seq1 158 8e-34 seq4 143 2e-29 seq8 132 3e-26 >seq10 Length=718177 Score = 165 bits (182), Expect = 6e-36 Identities = 183/240 (76%), Gaps = 3/240 (1%) Strand=Plus/Minus Query 23600 AATTACTTAAAA-TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAA 23658 ||||| |||||| |||| ||||| ||||||||| | || || ||||| || ||| | ||| Sbjct 468224 AATTATTTAAAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAA 468165 Query 23659 GTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 ||||| || | || ||| |||| ||| |||||| |||| || || ||||||||| | Sbjct 468164 GTTGAATCTTCTGATACTATTGATAATGTTAAAAGTAAAA-TTCAAGATAAAGAAGGTAT 468106 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || ||||||||||| | ||||| ||||| || |||||| | ||||| | | || || Sbjct 468105 TCCACCAGATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATT 468046 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | ||||| || || |||||||| || || ||||||||||||||||| || |||| || Sbjct 468045 ATCTGATTATAATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG 467986 >seq1 Length=2713227 Score = 158 bits (174), Expect = 8e-34 Identities = 168/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 || ||||||||||| || || ||||| |||||| | ||||| || || | || || || Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| ||||| | |||| || || ||||||||| | || ||||||||||| | || Sbjct 1439368 GATAATGTTAAATCCAAAA-TTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATT 1439310 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 ||| ||||| || |||||| | ||||| | | | |||||| ||||| ||||| ||||| Sbjct 1439309 AATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAA 1439250 Query 23799 AGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || ||||||||||||||||| || |||| || Sbjct 1439249 AGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG 1439211 >seq4 Length=1551466 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || ||||| || || | |||||||| || | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| ||||| |||||| || || |||||||| | || |||||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAA-TTCAAGATAAAGAAGGAATTCCACCAGATCA 1333437 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || |||||||| |||||| | ||||| | | || ||| ||||| || Sbjct 1333436 ACAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAA 1333377 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | |||||||||||||| || |||| || Sbjct 1333376 TATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGG 1333329 Score = 138 bits (152), Expect = 8e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| | || || ||||| || ||| | |||||||| || | Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| |||| | || | || || ||||||||| | || || ||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGA-TTCAAGATAAAGAAGGTATTCCTCCTGATCA 1333209 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || |||||||| |||||| | ||||| | | || ||| ||||| || Sbjct 1333208 ACAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAA 1333149 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||||||||| ||| | ||||||||| | || || |||| || Sbjct 1333148 TATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGG 1333101 Score = 136 bits (150), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| |||||||| || || | || || ||||| || ||| | |||||||| || Sbjct 1334014 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCA 1333955 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || || |||| ||| ||||| |||| | | || |||||||| | || ||||| Sbjct 1333954 TCTGATACAATTGATAATGTTAAATCAAAGA-TCCAAGATAAAGAAGGAATTCCACCAGA 1333896 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| |||||||| || ||||| || ||| | ||||| | | |||||| || || Sbjct 1333895 TCAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTA 1333836 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 |||||| |||||||| || || | |||||||| ||||| Sbjct 1333835 CAACATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAG 1333797 >seq8 Length=720923 Score = 132 bits (146), Expect = 3e-26 Identities = 166/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 23614 CAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGAC 23673 || ||||| || ||||| | || || ||||| || ||| | |||||||| ||| | || Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 23674 ACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACA 23732 ||| |||| || |||||| |||| | || ||||||||| | || ||||||||||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAA-GATAAAGAAGGTATTCCACCAGATCAACA 254795 Query 23733 GCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACAT 23792 ||||| || ||||| || |||||| | ||||| | | | || ||| ||||| || || Sbjct 254794 ACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATAT 254735 Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||||| || || | ||||||||| | || || ||||||| Sbjct 254734 TCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGG 254690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009307516068