Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4 152 1e-31 seq10 120 7e-22 seq8 120 7e-22 seq1 118 3e-21 seq6 114 3e-20 >seq4 Length=1551466 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| | ||| | || ||||| ||||||||||| | ||||| || | |||||||| Sbjct 1333793 AAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCT 1333852 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||| ||||| || |||||||| | |||||||| || || ||||| ||||| Sbjct 1333853 ACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTC 1333912 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 || |||||||||||| || ||| || || || || || | ||| || ||||| || Sbjct 1333913 TTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGT 1333972 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || || ||||| || | ||| | ||||||||| Sbjct 1333973 AATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 1334014 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | || ||||| ||||||||||| | ||| || || | ||||||||| || Sbjct 1333568 TCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACC 1333627 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||| || || ||||| || || | ||||||||||| || ||||||||||| || Sbjct 1333628 GTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTT 1333687 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| || || || ||| || || || ||||| | ||| || ||||| ||||| Sbjct 1333688 ATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGAT 1333747 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || || | || | |||||| Sbjct 1333748 TGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | || || || || |||||||| | ||| ||||| | || ||||| || Sbjct 1333112 TCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACC 1333171 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || || || || || | |||||||| || || ||||||||||| || Sbjct 1333172 ATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTT 1333231 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| ||||| ||| ||| || || || || || | ||| || ||||| || || Sbjct 1333232 ATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAAT 1333291 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||||||||| | || | |||||| Sbjct 1333292 TGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| ||||||||||| | ||| ||||| | || ||||| |||||||||| || Sbjct 1333353 TGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCTAATTGT 1333412 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || || || | |||||||| || || ||||| ||||| || ||||| || ||| Sbjct 1333413 TTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTT 1333472 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 || ||| || || || || || | ||| || || || || || || || || || Sbjct 1333473 GATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGTTTTACCAGTT 1333532 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || | |||||| Sbjct 1333533 AAAGTTTTAACAAAGATTTGCAT 1333555 >seq10 Length=718177 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| ||||||||||| | ||| ||||| | || ||||| |||||||||| || || || Sbjct 468015 AGTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTACCATCTTCTAATTGTTTACC 468074 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 ||| || || | || |||||| || || ||||||||||| || ||||| || || || Sbjct 468075 AGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTACTTTT 468134 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| || || || || || | ||| || ||||| || || || || || || || || Sbjct 468135 AACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCTGTTAAGGT 468194 Query 225696 TTTTATGAACACTTGCATTTT 225716 ||| | || | ||||||||| Sbjct 468195 TTTAACAAAAATTTGCATTTT 468215 >seq8 Length=720923 Score = 120 bits (132), Expect = 7e-22 Identities = 160/221 (72%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | || ||||| ||||||||||| | ||| ||||| | || ||||| || Sbjct 254701 TCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTTCC 254760 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || ||||| || || | |||||||| || || ||||||||||| || Sbjct 254761 ATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCTTT 254820 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||| ||| || || || || || || || |||| ||| || ||||| || || Sbjct 254821 ATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAAAGTAAT 254880 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTAT 225718 || || || || |||||||| | || | ||| ||| ||| Sbjct 254881 AGTTTTACCAGTTAAAGTTTTGACAAAAATTTG-ATTATAT 254920 >seq1 Length=2713227 Score = 118 bits (130), Expect = 3e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| ||||||||||| | || ||||| | |||||||| |||||||||| || || || Sbjct 1439240 AGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCTTCTAATTGTTTACC 1439299 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 ||| ||||| | || |||||| || || || |||||||| || ||||| || || || Sbjct 1439300 AGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATTTTGGATTT 1439359 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| || ||||| || || | |||||| ||||| ||||| || || || || | || Sbjct 1439360 AACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGTTTTACCTGTAAGGGT 1439419 Query 225696 TTT 225698 ||| Sbjct 1439420 TTT 1439422 >seq6 Length=1153196 Score = 114 bits (126), Expect = 3e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| Sbjct 934326 GAAAATTTGACCATCTGTAATAGAAATAACATTAGTTGGAATATAAGCGGAGACATCACC 934267 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580 |||| ||||| | ||||||||| || |||| ||| |||||||| || || Sbjct 934266 ACCTTGAGTTTCAATAACAGGTAAAGCAGTTAATGAACCACCACCTAATTT 934216 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 5022 CAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGGTAAA 5081 ||||| | || |||| || | ||||| ||| || |||| |||||||||||||||||| Sbjct 934000 CAATATTTAGCTCCATTTACTGCTTGTGCTATTGGTGAATGGTTTAGAGATAATGGTAAA 934059 Query 5082 CATGCTTTAATCATCTACGATGATTTAAGTAAACAA 5117 ||||||||||| |||| ||||||||| |||||| Sbjct 934060 CATGCTTTAATTGTCTATGATGATTTATCAAAACAA 934095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530115169274