Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq10 122 7e-23 seq4 107 2e-18 seq1 93.3 3e-14 seq8 89.7 4e-13 >seq10 Length=718177 Score = 122 bits (134), Expect = 7e-23 Identities = 181/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| || | || ||||||||||||||||||||||| ||||| | Sbjct 467986 CCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGAT 468045 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | |||||| |||||||| || ||| | || | |||||||| ||| || Sbjct 468046 AATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGA 468105 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | |||||||| || |||||| ||| |||| | | || || | || | Sbjct 468106 ATACCTTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACT 468165 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATATAT 101251 || | ||||| ||||| || || || ||||||| ||||||||||||| ||| |||| || Sbjct 468166 TCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTTTA-AATA-AT 468223 Query 101252 TTT--TTACTTTG 101262 ||| ||| |||| Sbjct 468224 TTTGATTATTTTG 468236 >seq4 Length=1551466 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| || | || | ||||||||||||||||||||| ||||| | Sbjct 1333329 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAT 1333388 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | |||||| |||||||| || ||| | || | | |||||| ||| || Sbjct 1333389 AAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGA 1333448 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | |||||||| || ||||||| ||| |||| | | || || | || | Sbjct 1333449 ATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACT 1333508 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | |||||| ||||| || || || ||||||| ||| |||||||| Sbjct 1333509 TCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | || | || | ||||||||||||||||||||| || || | | Sbjct 1333557 CCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGAC 1333616 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | ||||| |||||||| || ||| | || | | |||||||||| || Sbjct 1333617 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGA 1333676 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | |||||||| || |||||| ||| |||| | | || |||| || | | Sbjct 1333677 ATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACT 1333736 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | || || || || || || || || || | |||||||||||| Sbjct 1333737 TCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 >seq1 Length=2713227 Score = 93.3 bits (102), Expect = 3e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| || | || |||||||||||||||||||| || ||||| | Sbjct 1439211 CCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGAT 1439270 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||| |||||||| || ||| | || | |||||||| ||| || Sbjct 1439271 AAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGG 1439330 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 | |||||||| || |||||| ||| |||| Sbjct 1439331 ATACCTTCTTTATCTTGAATTTTGGATTTAACAT 1439364 >seq8 Length=720923 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 101008 ATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATC 101067 ||| || |||| ||||| | || | || | ||||||||||||||||||||| ||||| Sbjct 254686 ATTACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATC 254745 Query 101068 GGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTAC 101127 | | ||| | |||||| |||||||| || ||| | || | | |||||| ||| Sbjct 254746 AGATAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGG 254805 Query 101128 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGT 101187 || | |||||||| || ||||| ||| || | | | || || | ||| Sbjct 254806 TGGAATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTC 254865 Query 101188 TGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTAT 101241 ||| | ||||||||||| || || || ||||| | ||||||||| ||||| Sbjct 254866 AACTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG-ATTAT 254918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660445515389