Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq15 464 5e-126 >seq15 Length=386167 Score = 464 bits (514), Expect = 5e-126 Identities = 643/893 (72%), Gaps = 13/893 (1%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||| || || ||||||| ||||| || ||||||||||| || |||| Sbjct 129432 AACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAA 129373 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||||||||||||||||||||||| ||||| || | || ||| ||||| | || Sbjct 129372 AGAAATATTTTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATTACCTAA 129313 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || | |||| || || |||||||| | ||| || | ||| | || || || || Sbjct 129312 AGCAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCAT 129253 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 || | ||| |||||| || | || ||| | |||| ||| ||| || ||||| Sbjct 129252 ACCTAATAAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTC 129193 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAA 4546 || || || | || | | | | ||||||||| | ||| | ||| ||||| Sbjct 129192 AGTAATAATTTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAGAAAATAATAA 129133 Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| ||||||||| ||| | |||||| ||||| | ||| | ||| || ||||| ||||| Sbjct 129132 ACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGTTAA 129073 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || |||||||||||||| ||||| | ||||||||| | ||||| || ||||| ||||| Sbjct 129072 ACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAAGAA 129013 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCTGGCTTTGTCTT 4725 || ||||| || || ||||| || ||||||| | | | ||| | || || | Sbjct 129012 AATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGC-ATCATTATCAT 128954 Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 |||||||| |||| ||||| | |||||||| |||| || |||||||| | || || | Sbjct 128953 TAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATTGCAT 128894 Query 4786 TAAAT---AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 ||||| |||||| ||||| ||| |||| ||||||||| |||| || || || Sbjct 128893 TAAATAAAAATTTA---TTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAAT 128837 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | |||||||||| |||||||| || ||| ||||| || ||||| ||| ||||||| | Sbjct 128836 AAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCAG 128777 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | ||||||||| | |||| |||| ||||| ||||| || || ||||| ||| | Sbjct 128776 GAATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAAG 128717 Query 4963 CTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCAGGCTTAA--GTTTT 5018 |||||||||| || |||| | ||| ||| ||| | || | | |||| | || Sbjct 128716 CTGCAAAAAATGCTAAAACTCTTGAAATAAAAAAT-CTTTCATTTTTATTTAAACGATTA 128658 Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078 ||||| | | ||||||||| ||||||||| |||||| |||||||||| || ||||| Sbjct 128657 TTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCA 128598 Query 5079 GCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 |||||||| ||||| |||||| ||| |||| | ||| |||| || ||||| Sbjct 128597 GCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049230468643