Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq4 129 1e-24 seq1 111 4e-19 seq10 89.7 1e-12 >seq4 Length=1551466 Score = 129 bits (142), Expect = 1e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||| | ||||||||| || |||||||| |||||||| || | ||||||| Sbjct 1333791 CTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTT 1333850 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || |||||||||| || ||||||||||| | | || || || | | |||||| Sbjct 1333851 CTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCT 1333910 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||| || ||| ||| ||| | || | | || || || ||||| | | Sbjct 1333911 TCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAA 1333970 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| ||||| || || | |||||| ||||| | |||||||| Sbjct 1333971 GTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 1334014 Score = 105 bits (116), Expect = 2e-17 Identities = 156/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||||||||| || |||||||| || || ||||| | ||| ||||| |||||||||| Sbjct 1333352 ATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCTAATTG 1333411 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| ||||| || || | | || || || | | |||||||| || ||||||||||| Sbjct 1333412 TTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTT 1333471 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | ||| ||| | || | | || || || ||||| | ||||| ||||| || || Sbjct 1333472 TGATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGTTTTACCAGT 1333531 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCTA 152119 | ||| || || |||| ||||| ||| |||| |||| Sbjct 1333532 TAAAGTTTTAACAAAGATTTGCATACCACCTCTTAATCTA 1333571 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||||||||| || |||||||| || || || || | |||||||| || Sbjct 1333568 TCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACC 1333627 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||||| ||| || || || || | | || ||||| | | || ||||| || Sbjct 1333628 GTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTT 1333687 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| ||||||| | || | | |||||| |||||||| | ||| || Sbjct 1333688 ATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGAT 1333747 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||||| || || | ||||| Sbjct 1333748 TGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 93.3 bits (102), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | |||||| |||||||||||||| || || ||||| | ||| ||||| || Sbjct 1333112 TCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACC 1333171 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| ||||| || || | | || || || | | || ||||| || Sbjct 1333172 ATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTT 1333231 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || || ||| | || | | || || || ||||| | |||||| Sbjct 1333232 ATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAAT 1333291 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 ||||| || || | ||| || || || | ||||| ||| |||| ||| Sbjct 1333292 TGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCATACCACCTCTTAATCT 1333342 >seq1 Length=2713227 Score = 111 bits (122), Expect = 4e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | ||| || |||||||| ||||| ||||| | ||||||||| |||||||||| Sbjct 1439234 ATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCTTCTAATTG 1439293 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | || || || || | | ||| ||||| || ||||||||||| Sbjct 1439294 TTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATTTT 1439353 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | | || ||| || ||||| | ||| |||||||| || || Sbjct 1439354 GGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGTTTTACCTGT 1439413 Query 152081 GAGAGTCTTCACGAAG 152096 || || || || ||| Sbjct 1439414 AAGGGTTTTAACAAAG 1439429 >seq10 Length=718177 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | ||| || |||||||| || || ||||| | ||| ||||| |||||||||| Sbjct 468009 ATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTACCATCTTCTAATTG 468068 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || | || || || || | | || ||||| || ||||||||||| Sbjct 468069 TTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTT 468128 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | || ||| || ||||| | |||||| ||||| || || Sbjct 468129 ACTTTTAACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCTGT 468188 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || || || | |||||||| Sbjct 468189 TAAGGTTTTAACAAAAATTTGCATTTT 468215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819750383641