Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq10 138 1e-27 seq4 134 1e-26 seq8 114 1e-20 seq1 87.8 2e-12 >seq10 Length=718177 Score = 138 bits (152), Expect = 1e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 111093 TTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGA 111152 ||||||||||||||||||||| ||||| || || || ||||| ||||| | ||| || Sbjct 468219 TTTAAAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGA 468160 Query 111153 ACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGT 111212 | | ||| || ||| | || ||| |||||| || |||||||| |||| Sbjct 468159 ATCTTCTGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACC 468100 Query 111213 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111272 ||||||||||| | |||| ||| || |||||||| |||||| || ||| | | || Sbjct 468099 AGATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGA 468040 Query 111273 TTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111311 ||||||||| ||||||||||| || |||||||||| || Sbjct 468039 TTATAATATTCAAAAAGAATCAACTTTACATTTAGTTTT 468001 >seq4 Length=1551466 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| ||||| || || || |||||||||||| ||||| ||| | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | || ||| ||||||| || |||||||| |||| |||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | |||| ||| || |||||||| |||||| || ||| | | ||||||||| Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTT 111311 || ||||||||||| || || |||||||| || Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTT 1333344 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| ||||| || ||||| ||||| | ||| ||| | Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | || || || ||| || |||||||| |||| |||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | |||| ||| || |||||||| |||||| || ||| | | ||||||||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || |||||||| |||||||| |||||||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGT 1333119 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||||||||| || || || || || || || || | ||| ||| | Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | || ||| |||||| || |||||||| |||| || ||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | |||| ||| || |||||||| ||||| || |||| || | || |||||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || ||||||||||| || || |||||||| Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGT 1333575 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 111093 TTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGA 111152 ||| |||||||||||||| ||||| || || || || ||||||||||| | ||| || Sbjct 1334018 TTTCAAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGA 1333959 Query 111153 ACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGT 111212 | | ||| | ||| | || ||| ||| || || |||||||| |||| Sbjct 1333958 ATCATCTGATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACC 1333899 Query 111213 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111272 ||||||||| | | || | || || || ||||| |||||| || |||| | | || Sbjct 1333898 AGATCAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGA 1333839 Query 111273 TTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111311 || || || ||||||||||| || || |||||||| || Sbjct 1333838 CTACAACATTCAAAAAGAATCAACTCTTCATTTAGTCTT 1333800 >seq8 Length=720923 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 111103 CAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGAT 111162 ||||||||||||||||| || || || ||||| ||||| | ||| ||| || ||| Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 111163 TCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAA 111222 || ||| | || ||| ||||| || |||||||| |||| ||||||||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACAA 254794 Query 111223 AGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATA 111282 | | |||| ||| || |||||||| |||||| | ||| | | ||||||||||| Sbjct 254793 CGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATATT 254734 Query 111283 CAAAAAGAATCTACACTACATTTAGT 111308 ||||||||||| || || |||||||| Sbjct 254733 CAAAAAGAATCAACTCTTCATTTAGT 254708 >seq1 Length=2713227 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 111109 TTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTT 111168 ||||| ||||| | || || ||||| || || | ||| |||| | ||| | || Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 111169 GGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTT 111228 | | || ||| |||||| || |||||||| | || ||||||||||| | Sbjct 1439368 GATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTA 1439309 Query 111229 ATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAA 111288 || | ||| || |||||||| |||||| | |||| | | |||||||| || |||||| Sbjct 1439308 ATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAA 1439249 Query 111289 GAATCTACACTACATTTAGTGTT 111311 ||||| || |||||||||| || Sbjct 1439248 GAATCAACTTTACATTTAGTTTT 1439226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421810835001496