Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq25 107 4e-18 >seq25 Length=1112461 Score = 107 bits (118), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 319810 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 319869 || || | ||| || || || || ||||| | | || ||| ||| ||||| |||||| Sbjct 744282 CCATCAATATCATGCTCAACATACACAGTTCTAAGGACGTCCTGAGATGGGAAACCTTCA 744223 Query 319870 AGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACAC 319929 | ||||||||| | || || || ||||| || ||||| || ||||| || || || Sbjct 744222 ACCTGGCCGTTAGCCATTGCCTTCAGAAGGGTAGACTTACCAGCACCGTTAGGGCCGCAA 744163 Query 319930 AGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCA 319989 |||||||| | |||| | |||| | | | | ||||||| |||||| || || Sbjct 744162 AGACCGTATCTTCTTCCTCTCTTCAAACGCAGCTGAGATTTGTTCAAAAGAATCTTAGCA 744103 Query 319990 CCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACCG 320031 || || |||| ||| || ||||| | ||| |||||||||||| Sbjct 744102 CCGTAAGCCAAAGAGAACTCACAGTTACAAAGATCCTCACCG 744061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823593398900