Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 1e-13 >seq23 Length=1356690 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/235 (69%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 97396 CCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 |||| |||||| || |||||||| |||||||||||||| || | ||||| | || || Sbjct 1162481 CCTT-ATATTCGGCACCAAAATGTCTCCATTGGAATCCGTATATCGGTCCCAAATCATCT 1162423 Query 97456 TCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAA 97515 || |||||| || || | ||||||||| || |||||||| | |||||| Sbjct 1162422 TCCCGTCTATCTGTGAGCCCTATAGAATCTAAATATTCTCTTGATCCATTACCTTCCCAA 1162363 Query 97516 ATGTGCACACCAGATGCT--GCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACA 97573 ||||| ||| | || | ||| |||| | || ||| ||| ||| ||||||| Sbjct 1162362 ATGTG--AACCTTCTTCTCAGAAAGAACTTTACCATCGGTACTTCCAGAGATGAACCACA 1162305 Query 97574 ACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | | ||| | || | |||| | || | |||||||| ||||| || || ||||| Sbjct 1162304 AAAGTTCATGCAATATACCTTTGAAATAGACTCTCTTGGTTGTCAACAGTGGAAA 1162250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783873207100