Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq12 125 6e-24 seq1 102 7e-17 >seq12 Length=1432871 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||||| |||||||| | |||||||| || || |||||||| || Sbjct 1192721 TACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCG 1192780 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | |||||| | ||| || ||||| |||| | | ||||||||| || | Sbjct 1192781 ACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTG 1192840 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| || ||||| || || | || | |||||| | ||| | Sbjct 1192841 GGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCA 1192900 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || ||||||| ||| || || ||||| ||||| Sbjct 1192901 CCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 1192949 >seq1 Length=1856900 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | |||||||| |||||||| | ||||| || || ||||||||||| || Sbjct 768263 TACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAG 768204 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | |||||| | ||| || ||||| |||| | | ||| ||||| || | Sbjct 768203 ACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTG 768144 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||| || || ||||| || || | || | ||| || | ||| | Sbjct 768143 GAATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCA 768084 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || |||| || || || ||||| ||||| Sbjct 768083 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 768035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830241380760