Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq23 123 5e-23 >seq23 Length=1356690 Score = 123 bits (136), Expect = 5e-23 Identities = 282/416 (68%), Gaps = 9/416 (2%) Strand=Plus/Plus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATT-TTTGGACCCC---AAATGAGGTTCT-CTC 35207 || ||||| ||||||||||| ||| |||| |||| ||| | || | || ||| || Sbjct 1162178 GACAGAACAGGAACAGGAACA-TATTCATTATTTGCACCTCCACAACTCAGATTCAACTT 1162236 Query 35208 TTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGG 35267 ||| || | | ||||| | | || ||||||| | | | | | ||| | || Sbjct 1162237 ATCG-GATGGATCATTTCCACTGTTGACAACCAAGAGAGTCTATTTCAAAGGTATATTGC 1162295 Query 35268 AAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGA 35327 | ||||| | |||||||||| || | ||| || | |||| | | |||||||| Sbjct 1162296 ATGAACTTTTGTGGTTCATCTCTGGAAGTACCGATGGTAAAGTTCTTTCTGAGAAGAAGG 1162355 Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387 | ||||| ||| | | |||||| || | |||| ||| || || |||| | |||| Sbjct 1162356 TTCACATTTGGGAAGGTAATGGATCAAGAGAATATTTAGATTCTATAGGGCTCACAGATA 1162415 Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 || || | ||||||||||| ||||||||||||||||| | ||||||||||| |||| Sbjct 1162416 GACGGGAAGATGATTTGGGACCGATATACGGATTCCAATGGAGACATTTTGGTGCCGAAT 1162475 Query 35448 ATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAA 35507 || | ||| | | ||||| || || || ||| |||||| | || |||| | Sbjct 1162476 ATAAGGATTGTGATACGGATTACACAGGCAAAGGTTATGATCAGATTGCACATATCATCC 1162535 Query 35508 AGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562 | || ||| ||| |||||| ||||| | |||| ||| | | |||||||| || Sbjct 1162536 ACACATTGA-AGACAAATCCTTATGATCGCCGGATAATTCTTTCCGCATGGAACCC 1162590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583619628650