Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq12 381 7e-101
seq23 185 1e-41
>seq12
Length=1432871
Score = 381 bits (422), Expect = 7e-101
Identities = 1397/2146 (65%), Gaps = 77/2146 (4%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 62102
|||||||| |||| |||||| || || ||||||| |||||||| || || ||
Sbjct 861818 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTCTTC 861874
Query 62103 AGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 62161
| || |||| || ||||| ||||| || | ||| ||| | | ||||
Sbjct 861875 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 861934
Query 62162 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 62221
| |||||| |||||||||||| || |||| | || ||||| || ||||||||
Sbjct 861935 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATAAC 861993
Query 62222 TATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 62280
|||| | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 861994 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 862052
Query 62281 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCAT 62337
||| ||||| |||||||| || || || || || ||||| || |||
Sbjct 862053 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 862112
Query 62338 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATT 62397
| ||||||| | | || | | | |||| | | | || ||||| | |||||||
Sbjct 862113 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 862172
Query 62398 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62457
| |||| | ||||| | || || ||| ||| | ||||| | | || ||||
Sbjct 862173 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 862232
Query 62458 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62517
|||| ||| || | ||| || ||||||||||||||||||||||| | | |||||||
Sbjct 862233 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 862292
Query 62518 GACC-GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG---- 62572
|||| || | | || ||| | || ||| ||||| | ||| ||||||| ||
Sbjct 862293 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 862351
Query 62573 ---TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATA 62629
| | ||| ||||||||||||||| || || || ||| ||||
Sbjct 862352 TTGTTCCACATATC-------ATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATA 862404
Query 62630 TGTATCATATGGTCCTTCCTTCTCAGCTAGTT--TACAACTCGCCTCTAATGCACCGTAA 62687
||| | ||| | || || | | |||| || | | | || ||| |||||| ||| |
Sbjct 862405 TGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTC--CTCCAATGCAGCGTGA 862462
Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747
|| | ||| ||||| |||| | || || || |||| || || | ||||| || ||
Sbjct 862463 TACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAG 862521
Query 62748 TTTAAG-AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62806
| |||| | | || | || || | || || | ||||| | | |||||||| | |||
Sbjct 862522 TCTAAGCATGAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCT 862581
Query 62807 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62866
| | || ||| | || || |||| ||||| ||||| | || |||| || |
Sbjct 862582 CATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAA 862641
Query 62867 ATTTCTG---ACAA--TTACT----TTGACCACATCCTTCAGTTTGAGAAAATCAA--AT 62915
|| | | |||| ||| | ||| || | || | |||| | | ||| ||
Sbjct 862642 GTTACGGGTAACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGAT 862700
Query 62916 CGCCCATCT-ATT--ACAAA--CATGTTCAATGCAACAGATG-CCAGATTACACACGGCT 62969
| | ||||| | | ||||| || | ||| ||| | || ||| |||||||| |
Sbjct 862701 C-CTCATCTGACTCAACAAAGGCAGG--CAAA-CAAATGTTGGCCAAGTTACACACACCA 862756
Query 62970 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 63029
||||||| | | | || | | | |||| ||| | || | | ||||| ||
Sbjct 862757 ACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTA 862816
Query 63030 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63089
|| || || | |||||||||||| | ||||| |||||||| || | ||||| || |||
Sbjct 862817 CCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTA 862876
Query 63090 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGA 63148
|||||||| |||||| || | |||| | ||| | | || ||||||| | | |
Sbjct 862877 CCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTTCT 862935
Query 63149 T-TTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAA 63207
| || | ||||| || | ||||| |||| |||||| ||||||||||| || |||
Sbjct 862936 TCTTCCACGTCCTT-CTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAA 862994
Query 63208 CAT-TGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63266
||| || | || | | | || ||| | | ||| | ||||| ||| || |
Sbjct 862995 CATCTGAGAGACCTGGTGCCT-CAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCC 863053
Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326
|| || |||||||| | ||| ||||||||||||||| ||| | ||| | || | |
Sbjct 863054 ACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATC 863113
Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386
||||| || || ||||||| | | ||||| || | | ||||||| |||||| ||
Sbjct 863114 TCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGC 863173
Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63446
|||||||| || || || | || || | ||||| || || ||||| | ||||||||
Sbjct 863174 TCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCA 863233
Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506
|| | || | || | | ||| ||||| |||||||| ||| ||||||| |||||||
Sbjct 863234 GTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCA 863293
Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTT 63565
||||| ||| ||| |||||| || ||| ||| ||||| || || || || | ||
Sbjct 863294 ATATACGAACCAGTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTT 863352
Query 63566 AGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCAT 63625
||| || || || || |||| || || || ||||| ||||| || ||||| ||||
Sbjct 863353 AGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCAT 863412
Query 63626 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGG 63685
|| || || || ||||| || | || | ||| || ||||| || || || ||
Sbjct 863413 TGCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGG 863472
Query 63686 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG-TCTCAATAGCTGAGTCTA 63744
|| || || || || || | | || | | | || | | ||| | || || |
Sbjct 863473 TGATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAG-GAA 863531
Query 63745 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
|||| |||||| || || || || | ||| | | ||| || ||||||||| |||
Sbjct 863532 TATCATCACCATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAA 863591
Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864
|| || ||| |||||| || || ||||||||| || |||||||| |||||||
Sbjct 863592 CCTTACCATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGT 863651
Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTA 63924
| ||||| || |||||| |||| | || || | || |||||||| | |||| |
Sbjct 863652 AACTGAAGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAACAA 863711
Query 63925 TATCCATGGTAATACT----TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 63980
| | ||| || ||||| || ||||| | ||| | || |||||
Sbjct 863712 T----CTTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAG 863767
Query 63981 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 64040
|||||| ||| |||||| || || ||| || | || || || | |||||| | ||||
Sbjct 863768 TAGTTGTATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTT 863827
Query 64041 GATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGC 64099
|| || || | ||| ||||| | | | ||||| || ||||| ||| || || || ||
Sbjct 863828 GAGATTGCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGC 863886
Query 64100 TGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 64145
||| |||| || | || | ||||||| || | || || || |||
Sbjct 863887 TGCAGTTTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 863932
>seq23
Length=1356690
Score = 185 bits (204), Expect = 1e-41
Identities = 568/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 33312 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33371
|| || || |||||||| || || |||| || |||||||||||||| || || |||||
Sbjct 991502 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 991443
Query 33372 GTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCT 33431
|| || ||||||| || | |||||||| | || ||| || || || ||| ||
Sbjct 991442 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCA 991383
Query 33432 ATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTA 33491
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 991382 ACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTC 991323
Query 33492 -AGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACT 33550
||||| | || | |||| || || | || || || | | | | | |||
Sbjct 991322 CAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTACT 991264
Query 33551 CGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTC 33610
|||||||| || || |||| | ||||| |||||| || |||||||| ||
Sbjct 991263 TGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATC 991204
Query 33611 TCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 33670
||| | || | |||||||| ||||| || || ||||| | || | ||| || | |||
Sbjct 991203 TCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCA 991144
Query 33671 AAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33730
|| ||||| || || ||||| || || || | ||||| | |||||||| |||| |
Sbjct 991143 GAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAA 991084
Query 33731 TCTCTCTCCATAACCGGCGCTGTCATG---TATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
|||||| |||| || |||| |||||| | |||||| |||||||
Sbjct 991083 TCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTC 991024
Query 33788 TTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTT 33847
|| | | || || || | |||||||| || | |||| || || | || |
Sbjct 991023 CTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAGT 990964
Query 33848 AACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTG 33907
| ||| || ||||||||||| ||| | || || || ||||| |||| |||||
Sbjct 990963 GATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTG 990904
Query 33908 AAATCCGTAGAAACATCTAGCCTC-GGTAATCTGCACTTCTG-TACAAAATCGTTC--TG 33963
|| || ||||| ||| ||||| ||||| |||||| ||| | || || |||| ||
Sbjct 990903 GAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTGTG 990848
Query 33964 CTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 34023
| ||||| |||| || || ||||| || ||||| || ||||| ||| | || |
Sbjct 990847 CCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGA 990788
Query 34024 AATATTTTTCGTCTGGTGTTAGT----TTATTCCAATCATTGATATCTTTAGATATATCC 34079
| ||| | || | ||| || | | |||||| || | | ||| || || | |||
Sbjct 990787 AGTATCTCTCAT-TGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 990729
Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 34139
| || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 990728 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 990669
Query 34140 TATTGGATTGGGAAAATAACAAATCT 34165
|| || || ||||| || || |||||
Sbjct 990668 TACTGAATAGGGAACATCACGAATCT 990643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817363818400
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