Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq25 98.7 1e-15 >seq25 Length=1112461 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 139536 GGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGC 139595 |||| |||| ||| | | ||| ||||||| || |||||||||||||| || ||||| Sbjct 695685 GGCCTCCTCTTAACCTAAGAACCAAGTGAAGAGTTGACTCTTTTTGAATATTGTAATCAG 695744 Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | ||| || |||||| | || ||||| ||| | |||| | ||||| || || | Sbjct 695745 AAAGTGTTCTTCCGTCTTCCAATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTG 695804 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | || ||||| || || || ||||| || | | || | ||||| | | || | Sbjct 695805 GAATTCCTTCCTTATCTTGAATCTTTTGCTTAACATTATCGATAGTGTCAGAAGATTCAA 695864 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | || | ||||| || ||||||||||| || || |||||||| Sbjct 695865 CCTCTAGCGTGATTGTCTTTCCCGTCAACGTTTTAACAAAGATTTGCAT 695913 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || || |||| ||||||||||||||||| || ||||| | ||| || |||||| Sbjct 695933 ACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 695992 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | || ||||| ||| | |||| | ||||| || || || || ||||| || || Sbjct 695993 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 696052 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || ||||| || | | || | ||||| | | || ||||| | || | ||||| Sbjct 696053 ATCTTTTGCTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTTT 696112 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||||||||| || || |||||||| Sbjct 696113 CCCGTCAACGTTTTAACAAAGATTTGCAT 696141 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || || |||| ||||||||||||||||| || ||||| | ||| || |||||| Sbjct 696161 ACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 696220 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | || ||||| ||| | |||| | ||||| || || || || ||||| || || Sbjct 696221 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 696280 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || ||||| || | | || | ||||| | | || ||||| | || | ||||| Sbjct 696281 ATCTTTTGCTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTTT 696340 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||||||||| || || |||||||| Sbjct 696341 CCCGTCAACGTTTTAACAAAGATTTGCAT 696369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063813976000