Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq25 98.7 1e-15
>seq25
Length=1112461
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 139536 GGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGC 139595
|||| |||| ||| | | ||| ||||||| || |||||||||||||| || |||||
Sbjct 695685 GGCCTCCTCTTAACCTAAGAACCAAGTGAAGAGTTGACTCTTTTTGAATATTGTAATCAG 695744
Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655
| ||| || |||||| | || ||||| ||| | |||| | ||||| || || |
Sbjct 695745 AAAGTGTTCTTCCGTCTTCCAATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTG 695804
Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715
| || ||||| || || || ||||| || | | || | ||||| | | || |
Sbjct 695805 GAATTCCTTCCTTATCTTGAATCTTTTGCTTAACATTATCGATAGTGTCAGAAGATTCAA 695864
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| | || | ||||| || ||||||||||| || || ||||||||
Sbjct 695865 CCTCTAGCGTGATTGTCTTTCCCGTCAACGTTTTAACAAAGATTTGCAT 695913
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| || |||| ||||||||||||||||| || ||||| | ||| || ||||||
Sbjct 695933 ACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 695992
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
| || ||||| ||| | |||| | ||||| || || || || ||||| || ||
Sbjct 695993 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 696052
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| ||||| || | | || | ||||| | | || ||||| | || | |||||
Sbjct 696053 ATCTTTTGCTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTTT 696112
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| ||||||||||| || || ||||||||
Sbjct 696113 CCCGTCAACGTTTTAACAAAGATTTGCAT 696141
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| || |||| ||||||||||||||||| || ||||| | ||| || ||||||
Sbjct 696161 ACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 696220
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
| || ||||| ||| | |||| | ||||| || || || || ||||| || ||
Sbjct 696221 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 696280
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| ||||| || | | || | ||||| | | || ||||| | || | |||||
Sbjct 696281 ATCTTTTGCTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTTT 696340
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| ||||||||||| || || ||||||||
Sbjct 696341 CCCGTCAACGTTTTAACAAAGATTTGCAT 696369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063813976000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |