Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq12 361 8e-95
seq23 185 1e-41
>seq12
Length=1432871
Score = 361 bits (400), Expect = 8e-95
Identities = 1387/2140 (65%), Gaps = 65/2140 (3%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 78774
|||||||| |||| |||||| || || ||||||| |||||||| || || ||
Sbjct 861818 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTCTTC 861874
Query 78775 AGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 78833
| || |||| || || || ||||| || | ||| ||| | | ||||
Sbjct 861875 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 861934
Query 78834 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 78893
| |||||| |||||||||||| || |||| | || ||||| || ||||||||
Sbjct 861935 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATAAC 861993
Query 78894 TATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 78952
|||| | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 861994 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 862052
Query 78953 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTT 79009
||| ||||| |||||||| || || || || || ||||| || | |
Sbjct 862053 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 862112
Query 79010 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 79069
| ||||||| | | || | | | |||| | | | |||||||| | || ||||
Sbjct 862113 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 862172
Query 79070 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTAT 79129
| |||| | ||||| | || || ||| ||| ||||||| | |||| ||||
Sbjct 862173 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 862232
Query 79130 TTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 79189
|||| ||| || | ||| || || || ||||||||||||||||| | | |||||||
Sbjct 862233 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 862292
Query 79190 GACC-GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACA 79248
|||| || | | || ||| | || |||| ||||| ||||| ||||| | ||
Sbjct 862293 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 862351
Query 79249 ACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCA 79308
||||| | |||||||||||||||||| || ||| || ||| ||||| | |
Sbjct 862352 TTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGA 862411
Query 79309 TAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTT 79368
|||| || || | | || | | |||| ||||| ||| ||| | |||
Sbjct 862412 TAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTC 862471
Query 79369 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAG-AG 79427
|| || |||| | || || || |||| ||| | | ||||| || || | |||| |
Sbjct 862472 TCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAGTCTAAGCAT 862530
Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487
| || | || || | || || | ||||| | | |||||||| | |||| | || ||
Sbjct 862531 GAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGA 862590
Query 79488 AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG-- 79545
| || || |||| ||||| ||||| | || |||| || | || | |
Sbjct 862591 GTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGT 862650
Query 79546 ----ACTAT--TACT-TTGACCACATCCTTTAGTTTGAGAAAATCAA--ATCGTCCATCT 79596
||| | || | ||| || | || | |||| | | ||| ||| || ||||
Sbjct 862651 AACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGATCCTC-ATCT 862708
Query 79597 -ATT--ACAAA--CATGTTCAACGCGACAGATG----CCAGATTACAAACGGCTACCTCA 79647
| | ||||| || | ||| ||| ||| ||| ||||| || | ||||||
Sbjct 862709 GACTCAACAAAGGCAGG--CAA----ACAAATGTTGGCCAAGTTACACACACCAACCTCA 862762
Query 79648 TTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707
| | | | || | | | ||| ||| | ||| | | || ||||| || ||
Sbjct 862763 TCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAG 862822
Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767
|| | |||||||||||| | ||||| |||||||| || | ||||| || |||||||||
Sbjct 862823 TTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTT 862882
Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGACTTGTA 79826
|| |||||| || | |||| | ||| | | || ||||||| | | | ||| |
Sbjct 862883 TCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTT--CTTCTT 862939
Query 79827 TCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCG 79884
| | | |||| | ||||| | || || ||| ||||||||||| || |||||||
Sbjct 862940 CCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCT 862999
Query 79885 TCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGT 79944
| || || || |||| | | ||| | ||||| | | || || ||
Sbjct 863000 GAGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGC 863059
Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004
|||||||| | ||| ||||||||||||||| ||| | ||| | | | | ||||||
Sbjct 863060 TTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCT 863119
Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064
|| || ||||||| | | ||||| || | | ||||||| |||||| || ||||||
Sbjct 863120 TTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAG 863179
Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124
|| || || || | || |||| ||||| || || ||||| | |||||||| || |
Sbjct 863180 TAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTG 863239
Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184
|| | || | | ||| ||||| ||||| |||||||||||||| || |||| |||||
Sbjct 863240 TTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATAC 863299
Query 80185 CTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGAT 80243
||| ||| |||||| || ||| ||| ||||| || || || || | ||||| ||
Sbjct 863300 GAACCAGTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTTAGAAAT 863358
Query 80244 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAG 80303
|| || || |||| || ||||| ||||| || || || ||||| |||| ||
Sbjct 863359 CAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAAC 863418
Query 80304 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 80363
|| || || ||||| || | || ||| || ||||| || || || || || ||
Sbjct 863419 TAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGC 863478
Query 80364 GTGCGTAAACCATTTTTCAGACAGTAGATTGTACG-TCTCAATAGCTGATTCTATATCCC 80422
|| || || || | | |||| | | || | | ||| | || | |||||
Sbjct 863479 ATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTA-GGAATATCAT 863537
Query 80423 ATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 80482
|||||| || || || || | ||| | | ||| || ||||||||| | | |||
Sbjct 863538 CACCATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTAC 863597
Query 80483 TATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 80542
||| ||| |||||| ||||| ||||||||| || |||||||| |||||||| |
Sbjct 863598 CATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTGA 863657
Query 80543 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 80602
|||| || |||||| |||| | ||||| | | |||||||| | |||| |||
Sbjct 863658 AGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAAC--AATC-- 863713
Query 80603 TGGTGATACT----TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658
| | | || ||||| || ||||| | ||| | || ||||| ||||||
Sbjct 863714 TTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAGTAGTTG 863773
Query 80659 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 80718
||| |||||| || || ||| || | || || || | |||||| | |||||| |
Sbjct 863774 TATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGAGATT 863833
Query 80719 GCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTAT 80777
|| | ||| ||||| ||| | ||||| |||||||| ||| || || || ||||| |
Sbjct 863834 GCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTGCAGT 863892
Query 80778 TTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 80817
||| || | || | ||||||| || | || || || |||
Sbjct 863893 TTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 863932
>seq23
Length=1356690
Score = 185 bits (204), Expect = 1e-41
Identities = 569/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 49690 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 49749
|| || || |||||||| || || |||| || |||||||||||||| || || |||||
Sbjct 991502 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 991443
Query 49750 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACA-AATTC 49808
|| || || |||| || | |||||||| | || ||| || || || ||| || ||
Sbjct 991442 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGC-ACAGAACTC 991384
Query 49809 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT 49868
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 991383 AACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCT 991324
Query 49869 A-AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCAC 49927
||||| | || | |||| || || || || || || | | | | | ||
Sbjct 991323 CCAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTAC 991265
Query 49928 TCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 49987
| ||||||||| || || |||| | ||||| |||||| || |||||||| |
Sbjct 991264 TTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCAT 991205
Query 49988 CTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 50047
|||| | || || ||||| || ||||| || || ||||| | || | ||| || | ||
Sbjct 991204 CTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACC 991145
Query 50048 AAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAA 50107
| || ||||| ||||| || ||||| || || | ||||| | || ||||| ||||| |
Sbjct 991144 AGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCA 991085
Query 50108 GTCTCTCTCCATAACTGGCGCTGTCATG---TATCCACTTTTGAGCCCAATCGGCCTTCT 50164
|||||| |||| || |||| |||||| | |||||| |||||||
Sbjct 991084 ATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCT 991025
Query 50165 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 50224
|| | | || || || | |||||||| || | |||| || || | ||
Sbjct 991024 CCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAG 990965
Query 50225 TAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCT 50284
| | ||| || ||||||||||| ||| | || || || ||||| |||| ||||
Sbjct 990964 TGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCT 990905
Query 50285 GAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGCACTTCTG-TACAAAATCGTTC--A 50340
| || || ||||| ||| ||||| ||||| |||||| ||| | || || ||||
Sbjct 990904 GGAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTGT 990849
Query 50341 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 50400
|| ||||| |||| || || || || || ||||| || ||||| ||| | ||
Sbjct 990848 GCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATG 990789
Query 50401 AAATGTTTTTCGTTGGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCT 50457
|| | | | || |||| | | || |||||| || | | ||| || || | |||
Sbjct 990788 AAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 990729
Query 50458 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517
| || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 990728 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 990669
Query 50518 TATTGGATTGGGAAAATAACAAATCT 50543
|| || || ||||| || || |||||
Sbjct 990668 TACTGAATAGGGAACATCACGAATCT 990643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268530649200
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