Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq23 104 3e-17 >seq23 Length=1356690 Score = 104 bits (114), Expect = 3e-17 Identities = 370/570 (65%), Gaps = 10/570 (2%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || || ||| |||| || ||| |||||||||| ||||| ||||||| || | Sbjct 990653 TGTTCCCTATTCAGTACGATGATATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCT 990712 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACT 125114 |||| | ||| ||| ||||||| || ||||| || ||| ||| | ||| | | || | Sbjct 990713 GGACTGCCGAGGAGATCGATCTCTCAAAGGATTTGACCGACTGGAATGACAAGAT-GAAT 990771 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 | | |||| || | || || || | | |||||||||||||||| || ||||| || Sbjct 990772 GCCAATGAGAGATACTTCATCTCTCGTGTCTTGGCCTTCTTTGCCGCTTCAGATGGTATT 990831 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTG 125233 ||| | || ||| || ||| | | | | ||| || || | || |||| Sbjct 990832 GTCGATGAGAATTTG-GCACAGAACTTTATGAAGCAGGTGCAGTTACCTGAGGCAAGAGC 990890 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 ||| || || ||||| || ||| |||||||| | ||||| || | || || |||| Sbjct 990891 CTTCTATGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACTTATTCCCTTTTGAT 990950 Query 125294 TGACATGTACATTCGCGATCCGCAA-CGT--AAACACATGCTCTTTAACGCAATCGACAC 125350 || | || || || | || || | || || || || || ||| | || Sbjct 990951 CGAGACCTATATCACTGACAAGAAAGAGTCCGACTACTTG---TTCAATGCCATCCATAC 991007 Query 125351 GGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || |||| | |||||| ||||| | | ||||| | | || | | Sbjct 991008 AATTCCACCTATTAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAATGATGATGC 991067 Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470 || ||| || || ||| |||| || || || ||| | || || | || || || || Sbjct 991068 TTTGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTCTCTGGATC 991127 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 ||||| ||||||| ||| | |||||| | || | ||||| || || ||| | ||| Sbjct 991128 GTTTGCCTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCTTACGTTCTCTAA 991187 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACA 125560 |||| |||| | |||| ||||| ||||| Sbjct 991188 CGAGCTTATCTGCAGAGATGAGGGTCTACA 991217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058922102800