Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq23 122 9e-23 >seq23 Length=1356690 Score = 122 bits (134), Expect = 9e-23 Identities = 350/527 (66%), Gaps = 16/527 (3%) Strand=Plus/Minus Query 21199 AACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAA 21258 |||||| || || || ||||| ||||| || |||| || ||| |||||| || || || Sbjct 991509 AACTCTCTTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAA 991450 Query 21259 TGGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT-AATCTATCTGCT 21316 ||||||| | | || || | || | || |||| | | ||||| || || || || Sbjct 991449 TGGATTTGTGACGTTGTAA-ACCTTCTCGCATCCCAATGC-GATAAGCAACCTGTCGGC- 991393 Query 21317 ACA-AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAG 21375 ||| || || | || ||| ||| | || | |||||||||| || || ||||| Sbjct 991392 ACAGAACTCAACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAG 991333 Query 21376 AGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAA-CA--ATTATATTTATTAT 21432 ||| | | || | |||| ||| || ||| || || || || ||| | || || || Sbjct 991332 AGCGTCTCTCCAGAAAGTTTTCTCAATATTAACAGCCTCGGTCATGATTCTCTTGATAAT 991273 Query 21433 --CCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAA 21490 ||| |||| || |||| | || || |||| | ||||||||||| | Sbjct 991272 GACCT-----TACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTA 991218 Query 21491 TGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCT 21550 || | ||| ||||| || | || | || ||||| || || | || ||||| || ||| Sbjct 991217 TGTAGACCCTCATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCT 991158 Query 21551 CTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCA 21610 ||||| || ||||| || || || ||||| | ||| || || || | || |||| |||| Sbjct 991157 CTCTTCTTCAACCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCA 991098 Query 21611 GCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCC 21670 ||||| ||||| |||| ||| | || || || | || ||||||| | ||| Sbjct 991097 GCAAAAGCAACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCC 991038 Query 21671 CATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 ||| ||||| || |||||| |||||||| || || || || Sbjct 991037 CATAAAGCCTTCTCCTTAATAGGTGGAATTGTATGGATGGCATTGAA 990991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900600537200