Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq12 338 8e-88
seq23 185 1e-41
>seq12
Length=1432871
Score = 338 bits (374), Expect = 8e-88
Identities = 1373/2135 (64%), Gaps = 55/2135 (3%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 62051
|||||||| |||| |||||| || || ||||||| |||||||| || || ||
Sbjct 861818 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTCTTC 861874
Query 62052 AGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 62110
| || |||| || ||||| ||||| || | ||| ||| | | ||||
Sbjct 861875 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 861934
Query 62111 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 62170
| |||||| |||||||||||| || |||| | || ||||| || ||||||||
Sbjct 861935 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATAAC 861993
Query 62171 TATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 62229
|||| | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 861994 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 862052
Query 62230 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62286
||| ||||| |||||||| || || || || || ||||| || |||
Sbjct 862053 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 862112
Query 62287 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62346
| ||||||| | | || | | | |||| | | | |||||||| | || ||||
Sbjct 862113 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 862172
Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406
| |||| | ||||| | || || ||| ||| | ||||| | | || ||||
Sbjct 862173 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 862232
Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466
|||| ||| || | ||| || ||||||||||||||||||||||| | | |||||||
Sbjct 862233 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 862292
Query 62467 GACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 62525
|||| || | | || ||| | || |||| ||||| | ||| ||||||| ||
Sbjct 862293 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 862351
Query 62526 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 62585
|||||||||||| || || || ||| ||||||| |
Sbjct 862352 TTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGA 862411
Query 62586 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62645
|| | || || | | |||| || | |||| |||||| ||| ||| | |||
Sbjct 862412 TAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTC 862471
Query 62646 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG-AG 62704
|| || |||| | || || || |||| || | | ||||| || || | |||| |
Sbjct 862472 TCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAGTCTAAGCAT 862530
Query 62705 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764
| || | || || | || || | ||||| | | |||||||| | |||| | || ||
Sbjct 862531 GAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGA 862590
Query 62765 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-- 62822
| | || || |||| ||||| ||||| | || |||| || | || | |
Sbjct 862591 GTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGT 862650
Query 62823 -ACAA--TTACT----TTGACCACATCCTTCAGTTTGAGAAAATCAA--ATCGCCCATCT 62873
|||| ||| | ||| || | || | |||| | | ||| ||| | |||||
Sbjct 862651 AACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGATC-CTCATCT 862708
Query 62874 ATTACAAACATGTTCAAGGCAACAGATG----CCAGATTACAAACGGCTACCTCATTAGC 62929
||| | | || | |||| ||| ||| ||||| || | ||||||| |
Sbjct 862709 GACTCAACAAAGG-CAGGCAAACAAATGTTGGCCAAGTTACACACACCAACCTCATCTGG 862767
Query 62930 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 62989
| | || | | | |||| ||| | || | | ||||| || || || || |
Sbjct 862768 AGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTT 862827
Query 62990 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63049
|||||||||||| | ||||| |||||||| || | ||||| || ||||||||||| |
Sbjct 862828 CTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGT 862887
Query 63050 CTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGAT-TTGTATCTC 63107
||||| || | |||| | ||| | | || ||||||| | | | | || | ||
Sbjct 862888 CTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTTCTTCTTCCACGTC 862946
Query 63108 CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63167
||| || | ||||| | || |||||| ||||||||||| || |||||| |
Sbjct 862947 CTT-CTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGAGA 863005
Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227
|| || ||| ||| | | ||| | ||||| ||| || ||| || ||||||
Sbjct 863006 CCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGCTTCATA 863065
Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287
|| | ||| ||||||||||||||| ||| | ||| | | | | ||||| || ||
Sbjct 863066 AATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTTACCA 863125
Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347
||||||| | | ||||| || | | ||||||| |||||| || |||||||| ||
Sbjct 863126 TGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATA 863185
Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407
|| || | || || | ||||| || || ||||| | |||||||| || | || |
Sbjct 863186 GCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGAAC 863245
Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467
|| | | ||| ||||| |||||||| ||| ||||||| ||||||| ||||| |||
Sbjct 863246 ACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATACGAACCA 863305
Query 63468 CTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526
||| |||||| || ||| ||| ||||| || || || || | ||||| || || ||
Sbjct 863306 GTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTTAGAAATCAAAGC 863364
Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586
|| |||| || || || |||||||| || || ||||| |||| || || ||
Sbjct 863365 ACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAA 863424
Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646
|| ||||| || | || ||| || ||||| || || || || || || || ||
Sbjct 863425 GCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGT 863484
Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACG-TCTCAATAGCTGAGTCTATATCCCATTGAT 63705
|| || | | || | | | || | | ||| | || || ||||| ||
Sbjct 863485 GAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAG-GAATATCATCACCAT 863543
Query 63706 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63765
|||| || || || || | ||| | | ||| || ||||||||| | | ||| || |
Sbjct 863544 GAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATTAA 863603
Query 63766 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63825
|| |||||| || || ||||||||| || |||||||| |||||||| ||||| |
Sbjct 863604 TTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTGAAGTCAC 863663
Query 63826 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC-----TATATCCAT 63880
| |||||| |||| | ||||| | | |||||||| | |||| |||| | |
Sbjct 863664 GGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAACAATCTTATAAACCT 863723
Query 63881 GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63940
| | ||||| || ||||| | ||| | || ||||| |||||| |||
Sbjct 863724 CATCA-----GAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAGTAGTTGTATAG 863778
Query 63941 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 64000
|||||| || || ||| || | || || || | |||||| | |||||| | || |
Sbjct 863779 ATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGAGATTGCAAG 863838
Query 64001 TCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGG 64059
||| ||||| | | | ||||| || ||||| ||| || || || ||||| |||| |
Sbjct 863839 TCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTGCAGTTTCAG 863897
Query 64060 CTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 64094
| | || | ||||||| || | || || || |||
Sbjct 863898 CAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 863932
>seq23
Length=1356690
Score = 185 bits (204), Expect = 1e-41
Identities = 568/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 33034 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33093
|| || || |||||||| || || |||| || |||||||||||||| || || |||||
Sbjct 991502 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 991443
Query 33094 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCT 33153
|| || || |||| || | |||||||| | || ||| || || || ||| ||
Sbjct 991442 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCA 991383
Query 33154 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA 33213
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 991382 ACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTC 991323
Query 33214 -AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACT 33272
||||| | || | |||| || || || || || || | | | | | |||
Sbjct 991322 CAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTACT 991264
Query 33273 CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTC 33332
||||||||| || || |||| | ||||| |||||| || |||||||| ||
Sbjct 991263 TGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATC 991204
Query 33333 TCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 33392
||| | || || ||||| || ||||| || || ||||| | || | ||| || | |||
Sbjct 991203 TCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCA 991144
Query 33393 AAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33452
|| ||||| || || |||||||| || || | ||||| | |||||||| |||| |
Sbjct 991143 GAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAA 991084
Query 33453 TCTCTCTCCATAACCGGCGCTGTCATG---TATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
|||||| |||| || |||| |||||| | |||||| |||||||
Sbjct 991083 TCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTC 991024
Query 33510 TTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTT 33569
|| | | || || || | |||||||| || | |||| || || | || |
Sbjct 991023 CTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAGT 990964
Query 33570 AACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTG 33629
| ||| || ||||||||||| ||| | || || || ||||| |||| |||||
Sbjct 990963 GATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTG 990904
Query 33630 AAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACTTCTG-TACAAAATCGTTC--CG 33685
|| || ||||| ||| ||||| ||||| ||| || ||| | || || |||| |
Sbjct 990903 GAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTGTG 990848
Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745
||||||| |||| || || || || || ||||| || ||||| ||| | || |
Sbjct 990847 CCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGA 990788
Query 33746 AATATTTTTCGTCTGGTGTTAGT----TTATTCCAATCATTGATATCTTTAGATATATCT 33801
| ||| | || | ||| || | | |||||| || | | ||| || || | |||
Sbjct 990787 AGTATCTCTCAT-TGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 990729
Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAA 33861
| || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 990728 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 990669
Query 33862 TATTGGATTGGGAAAATAACAAATCT 33887
|| || || ||||| || || |||||
Sbjct 990668 TACTGAATAGGGAACATCACGAATCT 990643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946966394800
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