Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 2e-30
seq26 100 7e-16
seq23 93.3 1e-13
>seq12
Length=1432871
Score = 149 bits (164), Expect = 2e-30
Identities = 300/440 (68%), Gaps = 4/440 (1%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || || | ||||| ||| ||||||||| |||| || |||||||| ||
Sbjct 863487 TTCACACATGCATCACCAACGTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCA 863428
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | |||||| || || || || || ||||||| || || | || |
Sbjct 863427 TGCTTCTTAGTTGCAATGAAAGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAG 863368
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725
|||||| | ||||| |||| ||| || || |||||| | || ||||| ||||| |
Sbjct 863367 TGTGCTTTGATTTCTAAGACTGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCC 863308
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTC 363784
|| | || | ||| ||| || || ||| || || || | |||| ||| |||
Sbjct 863307 ACTGGTTCGT-ATATTGCCGGTACTAATGG-TACATCCAACGGTATAATTCCGATGGTTC 863250
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
||||||| ||| |||||| || || || || || ||||| ||| | ||| ||
Sbjct 863249 GTGTGTTCAACAGTACTGCTAGATATGTGGATCAAGGTGGTAACAAGAGACCAGGTGCCA 863190
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
||||||| || | |||||| ||||| ||||| || || ||| | || || | || |
Sbjct 863189 TTGCTATTTACTTGGAGCCTTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGA 863130
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
| || |||||||| | |||||||||||| |||| || |||||| || | ||
Sbjct 863129 ATCATGGTAAAGAGGAGATTCGTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATT 863070
Query 363965 ATTTTATGAAGCGCGTGGAG 363984
||||||||||| ||||||
Sbjct 863069 TATTTATGAAGCGTGTGGAG 863050
>seq26
Length=1546578
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831
||||||||||| | |||||| ||| || || | |||||| |||||||||||| |||
Sbjct 306745 GTTCCCATGCTCAGGGTGTTTAACAGCACAGCAAAGTACGTTGACCAGGGTGGAAACAAG 306804
Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891
|| || || | | |||||| ||||| ||||| |||||| | || || ||
Sbjct 306805 CGTCCTGGTGCAATATGTGCGTATCTTGAGCCCTGGCATGCGGATATTCTGGAATTCCTC 306864
Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951
|| ||| ||| ||| || || |||||| |||| ||| | ||||| || ||||| |
Sbjct 306865 GACCTCAAGAAGAACCACGGCAAGGAGGAAATGCGGGCAAGGGATCTCTTTTATGCGTTG 306924
Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
||| || | |||| || |||| ||| ||| ||
Sbjct 306925 TGGATTCCGGACCTGTTCATGAGGCGTGTGAAG 306957
Score = 95.1 bits (104), Expect = 3e-14
Identities = 197/291 (68%), Gaps = 2/291 (1%)
Strand=Plus/Plus
Query 364756 ATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACA 364815
||||| ||||||||||| | |||||| | ||| || ||| ||||||||||| | |||
Sbjct 307753 ATGCCGACGGCTTCTACATCGCAGATCTTGGGATTCACCGAATGCTTCGAACCAATCACA 307812
Query 364816 AGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTA 364875
|||| | || | | | || |||||||| || | ||| || || ||||||
Sbjct 307813 TCCAATATCTACACCAGGAGAGTCCTTTCCGGTGAGCACCAGGTGGTAAACTCGTACCTC 307872
Query 364876 GTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCC 364935
|| | |||||| | | ||||| ||| | | |||||| || | || || |||
Sbjct 307873 ATCGACGATCTTGACAAGTTGGGGCTCTGGAACTCCGGAATGAAGGACCAGATTATTGCC 307932
Query 364936 GCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995
|| ||||| || | ||| | ||| |||| | || ||| | | |||| ||||||||
Sbjct 307933 GCCAATGGATCCATCCAGGATATTGCAGGCATCCCGGAAAACATCAAGCAGCTTTACAAA 307992
Query 364996 ACCGTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCG 365045
|| || ||||| || || || || | |||| |||||||| || || ||
Sbjct 307993 ACAGTCTGGGACATGTCTCAAAAGATC-ATCATCGATATGGCAGCGGACCG 308042
>seq23
Length=1356690
Score = 93.3 bits (102), Expect = 1e-13
Identities = 157/227 (69%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGT 22479
|| |||| | | |||||| | ||||| ||||| ||| |||||| |||||||| |
Sbjct 991006 ACAATTCCACCTATTAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAATGATGAT 991065
Query 22480 TCATTC---GCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536
| || || || | | |||| ||||||| ||||||| | || || ||||||
Sbjct 991066 GCTTTGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTCTCTGGA 991125
Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596
| ||| | ||||| ||| | || || | | | ||||| || || ||||| ||
Sbjct 991126 TCGTTTGCCTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCTTACGTTCTCT 991185
Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643
|| ||| | || || ||||||||||||| |||||||||||||| ||
Sbjct 991186 AACGAGCTTATCTGCAGAGATGAGGGTCTACATACCGATTTTGCATG 991232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353099023460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |