Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq25 116 3e-21
seq1 109 5e-19
seq12 105 6e-18
>seq25
Length=1112461
Score = 116 bits (128), Expect = 3e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044
|||| |||||| | ||||| || |||||||||||||| | || || | || || ||
Sbjct 696603 AACATCATGCAAATTTTTGTGAAGACATTAACTGGAAAGACAATCACGTTAGAGGTTGAA 696544
Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104
| ||||| ||||| | || || ||||||||| || || ||||| || || ||
Sbjct 696543 TCTTCTGACACTATCGATAATGTTAAGCAAAAGATTCAAGATAAGGAAGGAATTCCACCA 696484
Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164
|| || ||||| |||| | | ||| |||||| | ||||| | |||| | |||
Sbjct 696483 GACCAGCAGAGGTTGATATTTGCCGGTAAGCAATTGGAAGACGGAAGAACACTTTCTGAT 696424
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
|| || ||||||||||| ||||| ||||||| || | || ||||| ||||||
Sbjct 696423 TACAATATTCAAAAAGAGTCTACTCTTCATTTGGTCCTTAGGTTGAGGGGAGGA 696370
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | ||||| ||||| || || ||||| | || || | || || || |
Sbjct 696142 AATGCAAATCTTTGTTAAAACGTTGACGGGAAAGACAATCACGCTAGAGGTTGAATCTTC 696083
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| ||||| | || || ||||||||| || || ||||| || || || || ||
Sbjct 696082 TGACACTATCGATAATGTTAAGCAAAAGATTCAAGATAAGGAAGGAATTCCACCAGACCA 696023
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||||| |||| | | ||| |||||| | ||||| | |||| | ||||| ||
Sbjct 696022 GCAGAGGTTGATATTTGCCGGTAAGCAATTGGAAGACGGAAGAACACTTTCTGATTACAA 695963
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||||||||| ||||| ||||||| || | || ||||| ||||||
Sbjct 695962 TATTCAAAAAGAGTCTACTCTTCATTTGGTCCTTAGGTTGAGGGGAGGA 695914
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | ||||| ||||| || || ||||| | || || | || || || |
Sbjct 696370 AATGCAAATCTTTGTTAAAACGTTGACGGGAAAGACAATCACGCTAGAGGTTGAATCTTC 696311
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| ||||| | || || ||||||||| || || ||||| || || || || ||
Sbjct 696310 TGACACTATCGATAATGTTAAGCAAAAGATTCAAGATAAGGAAGGAATTCCACCAGACCA 696251
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||||| |||| | | ||| |||||| | ||||| | |||| | ||||| ||
Sbjct 696250 GCAGAGGTTGATATTTGCCGGTAAGCAATTGGAAGACGGAAGAACACTTTCTGATTACAA 696191
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||||||||| ||||| ||||||| || | || ||||| ||||||
Sbjct 696190 TATTCAAAAAGAGTCTACTCTTCATTTGGTCCTTAGGTTGAGGGGAGGA 696142
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | ||||| ||||| || || ||||| | || || | || || || |
Sbjct 695914 AATGCAAATCTTTGTTAAAACGTTGACGGGAAAGACAATCACGCTAGAGGTTGAATCTTC 695855
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| ||||| | || || ||||||||| || || ||||| || || || || ||
Sbjct 695854 TGACACTATCGATAATGTTAAGCAAAAGATTCAAGATAAGGAAGGAATTCCACCAGACCA 695795
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||||| |||| | | ||| |||||| | ||||| | |||| | ||||| ||
Sbjct 695794 GCAGAGGTTGATATTTGCCGGTAAGCAATTGGAAGACGGAAGAACACTTTCTGATTACAA 695735
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATA 24223
||||||||||| || || |||| || || | || || |||||||| || ||
Sbjct 695734 TATTCAAAAAGAGTCAACTCTTCACTTGGTTCTTAGGTTAAGAGGAGGCCTGTA 695681
>seq1
Length=1856900
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
||||||||| | || || || || || || || || | || ||| | || || ||| |
Sbjct 768032 AAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCT 768091
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
||| ||||| || | ||||| |||||||| || || || || || || || |||
Sbjct 768092 TCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCTGAT 768151
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
||||||||| |||| | | || ||||| | || |||| |||| | || ||
Sbjct 768152 CAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGACTAC 768211
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| || |||||||| |||| || || || ||||||||||||||
Sbjct 768212 AACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 768261
>seq12
Length=1432871
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|||||||||| | || || || || || || || || | || ||| | || || ||| |
Sbjct 1192953 CAAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAGTC 1192894
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||||||||| || | ||||| |||||||| ||||| || || || || || ||
Sbjct 1192893 TTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCAGA 1192834
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| |||||| |||| | | || ||||| | || |||| ||||| | || ||
Sbjct 1192833 TCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGACTA 1192774
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| || || || ||||| |||| || || || ||||||||||| ||
Sbjct 1192773 CAACATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 1192723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935842804650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |