Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 3e-30
>seq3
Length=433654
Score = 147 bits (162), Expect = 3e-30
Identities = 204/284 (72%), Gaps = 4/284 (1%)
Strand=Plus/Minus
Query 137829 CGAGTCTTGGACAATGGCCACGTTTGGCTTGCCGTTTTGCACCGACATGATGCACTTGCT 137888
|| ||| ||||||||| ||| | |||||| | ||| ||||| ||| | | |
Sbjct 65274 CGTGTCCTGGACAATGCCCATGACCGGCTTGTTGGACTGCGGCGACACGATCTGCCT--T 65217
Query 137889 GGCGCAGCTCAGCTCT--TTCAGCTCGGCAATGGCCTCGTACGACTGCGGCACGTGAATG 137946
||| | || ||| ||| | || ||| || | | ||||||||||||||| ||||| |||
Sbjct 65216 GGCACCGCACAGATCTCCTCCAACTCTGCCTTCGTCTCGTACGACTGCGGGACGTGCATG 65157
Query 137947 TTCATCTCGTCGCCGTCAAAGTCGCAGTTGAAGGGCTTCGTTATGGCCAGGTTGATTTTG 138006
||||||||||| ||||| |||||| |||| ||||| |||| | | || |||||| ||
Sbjct 65156 TTCATCTCGTCACCGTCGAAGTCGGCGTTGTAGGGCGTCGTCACCGACAAGTTGATCCTG 65097
Query 138007 AGCGTCTTGACTGGTTTGATGACCACCTTAAAGGCCATCATGGACGCCTTGTGCAGCGTC 138066
| |||| || || | | |||||| | |||||| ||| |||||| |||| |
Sbjct 65096 AACGTCGAGAACGGCATCACCCGCACCTTGTGGCACATCATCGACATCTTGTGAAGCGAC 65037
Query 138067 GGTTGCCGGTTGAGCAGCACGTAGTCGCCGTCCATCAGCTGCCG 138110
|| |||| ||||| ||||| |||||||||||||| |||||
Sbjct 65036 GGCTGCCTGTTGAAAAGCACCGGGTCGCCGTCCATCAAGTGCCG 64993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611391770728000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |