Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq12 347 2e-90
seq23 192 7e-44
>seq12
Length=1432871
Score = 347 bits (384), Expect = 2e-90
Identities = 1380/2136 (65%), Gaps = 57/2136 (3%)
Strand=Plus/Plus
Query 61850 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 61906
|||||||| |||| |||||| || || ||||||| |||||||| || || ||
Sbjct 861818 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTCTTC 861874
Query 61907 AGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 61965
| || |||| || ||||| ||||| || | ||| ||| | | ||||
Sbjct 861875 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 861934
Query 61966 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 62025
| |||||| |||||||||||| || |||| | || ||||| || ||||||||
Sbjct 861935 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATAAC 861993
Query 62026 TATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 62084
|| | | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 861994 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 862052
Query 62085 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62141
||| ||||| |||||||| || || || || || ||||| || |||
Sbjct 862053 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 862112
Query 62142 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62201
| ||||||| | | || | | | |||| | | | |||||||| | || ||||
Sbjct 862113 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 862172
Query 62202 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 62261
| |||| | ||||| | || || ||| ||| | ||||| | | | || ||||
Sbjct 862173 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 862232
Query 62262 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321
|||| ||| || | ||| || ||||||||||||||||||||||| | | |||||||
Sbjct 862233 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 862292
Query 62322 GACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 62380
|||| || | | || ||| | || |||| ||||| | ||| ||||||| ||
Sbjct 862293 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 862351
Query 62381 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 62440
|||||||||||| || || || ||| ||||||| |
Sbjct 862352 TTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGA 862411
Query 62441 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62500
|| | || || | | |||| || | |||| |||||| ||| ||| | |||
Sbjct 862412 TAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTC 862471
Query 62501 TCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG-AG 62559
|| || |||| | || || || | || || | | ||||| || || | |||| |
Sbjct 862472 TCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAGTCTAAGCAT 862530
Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619
| || | || || | || || | ||||| | | |||||||| | |||| | || ||
Sbjct 862531 GAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGA 862590
Query 62620 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-- 62677
| | || || |||| ||||| ||||| | || |||| || | || | |
Sbjct 862591 GTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGT 862650
Query 62678 -ACAA--TTACT----TTGACCACATCCTTCAGTTTGAGAAAATCAA--ATCGCCCATCT 62728
|||| ||| | ||| || | || | |||| | | ||| ||| | |||||
Sbjct 862651 AACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGATC-CTCATCT 862708
Query 62729 -ATT--ACAAA--CATGTTCAATGCAACAGATG-CCAGATTACAAACGGCTACCTCATTA 62782
| | ||||| || | ||| ||| | || ||| ||||| || | |||||||
Sbjct 862709 GACTCAACAAAGGCAGG--CAAA-CAAATGTTGGCCAAGTTACACACACCAACCTCATCT 862765
Query 62783 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 62842
| | | || | | | |||| ||| | || | | |||||||| || || ||
Sbjct 862766 GGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTC 862825
Query 62843 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 62902
| |||||||||||| | ||||| |||||||| || | ||||| || |||||||||||
Sbjct 862826 TTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCT 862885
Query 62903 ATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAGCCTTTATTATAGAT-TTGTATC 62960
|||||| || | |||| | ||| || || ||||||| | | | | || |
Sbjct 862886 GTCTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTTCTTCTTCCACG 862944
Query 62961 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63020
|| |||| | ||||| | || |||||| ||||||||||| || |||||| |
Sbjct 862945 TC-CTTCTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGA 863003
Query 63021 GTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63080
| || || ||| ||| | | ||| | ||||| ||| || ||| || ||||
Sbjct 863004 GACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGCTTCA 863063
Query 63081 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63140
|||| | ||| ||||||||||||||| ||| | ||| | | | | ||||| || |
Sbjct 863064 TAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTTAC 863123
Query 63141 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63200
| ||||||| | | ||||| || | | ||||||| |||||| || |||||||| |
Sbjct 863124 CATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAA 863183
Query 63201 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63260
| || || | || || | ||||| || || ||||| | |||||||| || | ||
Sbjct 863184 TAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGA 863243
Query 63261 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTC 63320
| || | | ||| ||||| ||||| |||||||||||||| || || | ||||| |
Sbjct 863244 ACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATACGAAC 863303
Query 63321 CACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379
|| ||| |||||| || ||| ||| ||||| || || || || | ||||| || ||
Sbjct 863304 CAGTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTTAGAAATCAAA 863362
Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439
|| || |||| || ||||| ||||| || || ||| ||||| |||| || ||
Sbjct 863363 GCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAG 863422
Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499
|| || ||||| || | || ||| || ||||| || || || || || || ||
Sbjct 863423 AAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGT 863482
Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACG-TCTCAATAGCTGAGTCTATATCCCATTG 63558
|| || || | | || | | | || | | ||| | || || |||||
Sbjct 863483 GTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAG-GAATATCATCACC 863541
Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618
|||||| || || || || | ||| | | ||| || ||||||||| | | ||| ||
Sbjct 863542 ATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATT 863601
Query 63619 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678
||| |||||| || || ||||||||| || |||||||| |||||||| |||||
Sbjct 863602 AATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTGAAGTC 863661
Query 63679 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 63738
|| |||||| |||| | ||||| | | |||||||| | |||| ||| | |
Sbjct 863662 ACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAAC--AATC--TTAT 863717
Query 63739 AATACT----TGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATA 63794
|| || ||||| |||||| | | ||| | || |||||| |||||| |||
Sbjct 863718 AAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAGTAGTTGTATA 863777
Query 63795 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 63854
|||||| || || ||| || | || || || | ||||| | |||||| | || |
Sbjct 863778 GATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGAGATTGCAA 863837
Query 63855 TTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCG 63913
||||||||| | | | ||||| || ||||| ||| || || || ||||| ||||
Sbjct 863838 GTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTGCAGTTTCA 863896
Query 63914 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCA 63949
|| | || | ||||||| || | || || ||||||
Sbjct 863897 GCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 863932
>seq23
Length=1356690
Score = 192 bits (212), Expect = 7e-44
Identities = 574/868 (66%), Gaps = 22/868 (3%)
Strand=Plus/Minus
Query 32391 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 32450
|| || || |||||||| ||||| | || || |||||||||||||| |||||||||||
Sbjct 991502 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 991443
Query 32451 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACA-AATTC 32509
|| || || |||| || | |||||||| | || ||| || || || ||| || ||
Sbjct 991442 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGC-ACAGAACTC 991384
Query 32510 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT 32569
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 991383 AACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCT 991324
Query 32570 A-AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTT-CTTCA 32627
||||| | || | ||||| || || || || || || |||| | | | | |
Sbjct 991323 CCAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTC-TCTTGATAATGACCTTA 991266
Query 32628 CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCG 32687
|| ||||||| | || || |||| | ||||| |||||| |||||||||||
Sbjct 991265 CTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCA 991206
Query 32688 TCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 32747
||||| | || | ||||| || ||||| || || ||||| | || | ||| || | |
Sbjct 991205 TCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAAC 991146
Query 32748 CAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATA 32807
|| || ||||| ||||| |||||||| || || | ||||| | || ||||| ||||
Sbjct 991145 CAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACC 991086
Query 32808 AGTCTCTCTCCATAACCGGCGCTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTC 32864
| |||||| |||| || ||| | |||||| | |||||| ||||||
Sbjct 991085 AATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTC 991026
Query 32865 TTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCT 32924
| || | | || ||||| | || ||||| || | |||| || || | ||
Sbjct 991025 TCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCA 990966
Query 32925 TTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATT 32984
| | ||| || || |||||||| ||| | || || || ||||| |||| ||
Sbjct 990965 GTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATC 990906
Query 32985 TGAAATCCGTAGAAGCATCTAGCCTC-GGTAATCTGTACTTCTG-TACAAAATCGTTC-- 33040
|| || || |||||| ||| ||||| ||||| ||| || ||| | || || ||||
Sbjct 990905 TGGAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTG 990850
Query 33041 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33100
||| ||||| |||| || || || || || ||||| || ||||| ||| | ||
Sbjct 990849 TGCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGAT 990790
Query 33101 AAAATATTTTTCGTCTGGTGTTAGT----TTATTCCAATCATTGATATCTTTAGATATAT 33156
|| ||| | || | ||| || | | |||||| || | | ||| || || | ||
Sbjct 990789 GAAGTATCTCTCAT-TGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGAT 990731
Query 33157 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCAT 33216
| | || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 990730 CGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCAT 990671
Query 33217 GATATTGAATTGGAAAAATAACAAATCT 33244
|| ||||| || || || || |||||
Sbjct 990670 CGTACTGAATAGGGAACATCACGAATCT 990643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631762388000
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