Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq12 179 4e-40
seq28 87.8 2e-12
>seq12
Length=1432871
Score = 179 bits (198), Expect = 4e-40
Identities = 892/1404 (64%), Gaps = 21/1404 (1%)
Strand=Plus/Plus
Query 113935 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 113994
|||| ||||||| || | ||| |||| || || || || || | ||||| || ||||
Sbjct 862189 TCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGA 862248
Query 113995 GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAAT 114054
|| || || || ||||| ||||||| | ||| ||| | ||||| | | |||
Sbjct 862249 AGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCAGTCTTGGCAAT 862308
Query 114055 GCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAA 114114
|||| || | |||||||| | | | | || | |||||||||| |
Sbjct 862309 CTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATA 862368
Query 114115 CTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTC 114174
|| || ||||| | || ||||| || || ||| |||||| || | ||||| || |
Sbjct 862369 TTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCAC 862428
Query 114175 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 114234
|| | | | | |||| | || |||||||||| |||||||| || || ||
Sbjct 862429 AGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTT 862488
Query 114235 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 114294
| || || || | ||||| | |||| || | || ||| || ||
Sbjct 862489 AAGCTCCCGTGCATCTGGACAGTCAAAAGGTAGTCTAAGCATGAAGAAGGTATCAGCAAG 862548
Query 114295 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-- 114352
||| |||| ||| || |||| || | | |||||| || || || || || |||
Sbjct 862549 ACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGC---CTCAGG 862605
Query 114353 -ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411
|| ||||| |||| || || ||||| | |||| || ||| ||||| || || ||
Sbjct 862606 AACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAAT 862665
Query 114412 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT-TGACATA-CTTAGGAAGG 114469
| || | ||| ||| | | || | || | || |||| |||| | | ||| |||
Sbjct 862666 CTTGTGCAACTTCTCGAAGTTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGG 862725
Query 114470 G---CGATTGACG-CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525
| | || | ||| ||||||||| |||||| | | |||||| | ||
Sbjct 862726 CAAACAAATGTTGGCCAAGTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAAC 862785
Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585
|| ||||| || ||| || ||||| ||||||||||| ||||| |||| | ||
Sbjct 862786 CTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATT 862845
Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645
||| ||||||||||| | |||| | || || || || || || || | || | |||
Sbjct 862846 ACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTG 862905
Query 114646 CTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 114704
| ||| | | || | | || ||| || | | || || || | |||||| |
Sbjct 862906 GTACCATAACTTCTGAGCCTT-CACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAG 862964
Query 114705 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 114764
|||| | || ||||| ||||| | |||||||| |||||||||| | ||
Sbjct 862965 TGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAG 863024
Query 114765 AGAAGAGAGACCA-TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823
|||| | | ||| ||| | ||| || ||||||||||| || | ||||| |||||
Sbjct 863025 AGAACAATGTCCACTTGTCGTTGCTC-TCCACACGCTTCATAAATAAATCTGGAATCCAA 863083
Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883
||||||| || | ||| || ||| || || | || ||||| | | ||
Sbjct 863084 AGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCG 863143
Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 114942
| |||||| | |||||| || ||||| || |||| ||| | || || | ||| |
Sbjct 863144 ATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTC 863203
Query 114943 ACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000
| |||| | || | ||||| || || || || || || |||| ||| |||||
Sbjct 863204 TTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATT 863263
Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGG 115060
||||| | ||| ||||| || || |||| || | ||| | | | ||
Sbjct 863264 ATACCGTTGGATGTACCATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGA 863323
Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120
||||| | ||||||||| || || ||| || || || |||| | | | | ||
Sbjct 863324 ATGTGAAGACCAATACCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCG 863383
Query 115121 TAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGC 115180
||||| || || || |||||| | || |||| | | |||||| ||||| || ||
Sbjct 863384 TAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGG 863443
Query 115181 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 115239
| ||| |||||||| ||||| | ||||||| || || |||| || || | |||||
Sbjct 863444 CGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGTGAA-GTATCTCTTTGACAT 863502
Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299
| || || | ||||| || ||||| || || || |||||||||| | || |
Sbjct 863503 CAAGTCATATGATTCCAACACCTTAGGAATATCATCACCATGAATACCGACGGCCACTCT 863562
Query 115300 CATAAACATGTATTGGGGTGTTTC 115323
||||| | || ||| ||| ||||
Sbjct 863563 CATAAGAAGGTGTTGTGGTCTTTC 863586
>seq28
Length=771433
Score = 87.8 bits (96), Expect = 2e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 160712 GTGGCACCAAGATCTGGTCTCGCTGTGAAGAGTGGTATCCAAGTTGGTGCGGGTGTTGTG 160771
||||||||||||||||| | || |||||| |||||| || ||||| ||||| |
Sbjct 288855 GTGGCACCAAGATCTGGATTAGCGGTGAAGCATGGTATTCATACCGGTGCTGGTGTCATT 288914
Query 160772 GATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCACACAGATTTC 160831
|| ||||||||| ||| ||||| || || || |||||||| | | | | |||||||
Sbjct 288915 GACTCAGACTACAGAGGAGAAGTTAAGGTTGTACTCTTCAACTTCAGCGATAAAGATTTC 288974
Query 160832 CAAATCAAAAGGGGGGATCGCATCGCGCAACTCATCTTAGAGA 160874
|| || ||| ||| | || || |||||||| | ||||
Sbjct 288975 AGCATTAACGCGGGTGATAGAATTGCACAACTCATTCTTGAGA 289017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353375992400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |