Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 8e-17
seq1 89.7 5e-13
>seq12
Length=1432871
Score = 102 bits (112), Expect = 8e-17
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | |||||||| || ||||||||||| |
Sbjct 1192723 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAC 1192782
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | ||||| | || ||||| | | |||| | | ||| || || || ||
Sbjct 1192783 AAAGTTCTGCCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGG 1192841
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| ||||| || | |||| || | |||||||| |||||||
Sbjct 1192842 GATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTCGGAAGACTCCA 1192900
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || ||||| |||| ||| || || ||||| |||||
Sbjct 1192901 CCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 1192949
>seq1
Length=1856900
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || ||||| |||||||||||||| |
Sbjct 768261 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 768202
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||||| | || ||||| | | |||| | | |||||| || || ||
Sbjct 768201 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 768142
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || || || ||| ||||| || | ||||| | | ||| |||| ||||||||
Sbjct 768141 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGT-CAATGGTATCGGAAGACTCCAC 768083
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || ||||| |||| || || || ||||| |||||
Sbjct 768082 CTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 768035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262213901600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |