Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq12 212 8e-50
>seq12
Length=1432871
Score = 212 bits (234), Expect = 8e-50
Identities = 1159/1823 (64%), Gaps = 43/1823 (2%)
Strand=Plus/Plus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|||| || || | ||||||||| || ||||| | |||| ||||||| |||| | |||
Sbjct 861842 GCCTGTGTACGTAAGTAGTACATACCTGTCTTCAAGCCCTTCTTCCAGCCATAAAAGTGC 861901
Query 115609 ATTGAGGACAACTTGGAGAGTGTTGG--ACTTTCCATGAAGAGGTTCATACTTTGGGATT 115666
|| || | ||| || | ||||| ||| ||| || ||||||| ||| || |
Sbjct 861902 ATGGAAGTCAATTTACCCATAGTTGGTGACTGCAAATG--GATGTTCATAGATTGAGACT 861959
Query 115667 GATCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCC 115725
| |||| | ||| |||| ||| || |||||| | || ||| |||| || |||
Sbjct 861960 GGCAGATGTATGCG-CCCCTATCAGCAGCCATAACGATGACAGACTTCTGAGAAATCTCC 862018
Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785
|| || || ||||| | ||||| || | ||| || | | | || || |||||
Sbjct 862019 CAAACTGTCCTGTACAACTTCTTGATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAA 862078
Query 115786 CCACCTGCCTTGACC-ATGAGATCCTTCAT---ATCCTTTGACCAGAGACCAATCTTCTT 115841
|| || | ||| |||| | |||||| ||| || ||| | || || | |
Sbjct 862079 CCGT-TGTCGTGAATGATGAAGTTCTTCATTGCATCGTT---CCATATTCCCATGTCAAT 862134
Query 115842 GAGATC-CTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 115900
||||| ||| || | || ||| || | || ||||| || || | ||||
Sbjct 862135 AAGATCTCTCAAC-ATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCT 862193
Query 115901 GATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 115960
|||||||||| | ||| |||| || || || || || | ||||| || |||| || |
Sbjct 862194 GATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAG 862253
Query 115961 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTT 116020
| || || ||||| ||||||| | ||| ||| | ||||| | |||
Sbjct 862254 AAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCAGTCTTGGCAATCTTAG 862313
Query 116021 CCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
|||| || | |||||||| | | | | || | |||||||||| | || |
Sbjct 862314 CCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTA 862373
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
| ||||| | || ||||| || || ||| |||||| ||| | ||||| || | || |
Sbjct 862374 GAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAA 862433
Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 116200
| | | |||| | || |||||||||| |||||||| || || || |
Sbjct 862434 GCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCT 862493
Query 116201 CCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTT 116260
|| || || | ||||| | || | || | || ||| || ||||| |
Sbjct 862494 CCCGTGCATCTGGACAGTCAAAAGGTAGTCTAAGCATGAAGAAGGTATCAGCAAGACCCT 862553
Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGG 116317
||| ||| || |||| || | | |||||| || || || || || ||| || |
Sbjct 862554 GGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGC---CTCAGGAACTG 862610
Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377
|||| |||| || || ||||| | |||| || ||| ||||| || || || | |
Sbjct 862611 GATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAATCTTGT 862670
Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT-TGACATA-CTTAGGAAGGG---C 116432
| | ||| ||| | | || | || | || |||| |||| | | ||| ||| |
Sbjct 862671 GCAACTTCTCGAAGTTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGGCAAAC 862730
Query 116433 GATTGACG-CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491
| || | ||| ||||||||| |||||| | | |||||| | || ||
Sbjct 862731 AAATGTTGGCCAAGTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCAC 862790
Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551
||||| || ||| || ||||| ||||||||||| ||||| |||| | ||||| |
Sbjct 862791 AGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAG 862850
Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611
|||||||||||| ||| | || || || || || || || | || | ||| | ||
Sbjct 862851 CATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACC 862910
Query 116612 AT-ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670
|| || || | | || ||| || | | || || || | |||||| |||||
Sbjct 862911 ATAACTTCTGAGCCT-TCACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTAC 862969
Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730
| ||| ||||| ||||| | | |||||||| |||||||||| | ||| ||||
Sbjct 862970 AATTTCTCGAACTCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAGAGAAC 863029
Query 116731 AGAGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789
| | ||| ||| | || ||| || |||||||| || | ||||| ||||| || ||
Sbjct 863030 AATGTCCACTTGTCGTTGCT-CTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGC 863088
Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849
| || | ||| || ||| || || | || ||||| | | || | |||
Sbjct 863089 TGGAAACAAATCACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAA 863148
Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC---- 116905
||| | |||||| || ||||| || |||| ||| | || | || | ||| | |
Sbjct 863149 GTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATAGC-AATGGCACCTGGTCTCTTGT 863207
Query 116906 GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATAC 116965
|||| | || | ||||| || || || ||| || || |||| ||| ||||| ||||
Sbjct 863208 TACCACCTTGATCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATAC 863267
Query 116966 CATCAGATTGGCCATTTGTCCC--CCGAATACGAGACTTGTTGGCTCTGACATCGTGGAT 117023
| | ||| ||||| || || | |||||| || | ||| | | | ||| ||
Sbjct 863268 CGTTGGATGTACCATTAGTACCGGCAATATACGA-ACCAG-TGGAACGAATGTTGTGAAT 863325
Query 117024 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTA 117083
||| | ||||||||| || || ||| || || || |||| | | | | ||||
Sbjct 863326 GTGAAGACCAATACCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTA 863385
Query 117084 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT 117143
||| || || || |||||| | || |||| | | |||||| ||||| || || |
Sbjct 863386 GATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGGCG 863445
Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCT 117202
||| |||||||| ||||| | ||||||| || || |||| || || | ||||||
Sbjct 863446 TGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGTGAA-GTATCTCTTTGACATCA 863504
Query 117203 TATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCA 117262
|| || | ||||| || ||||| || || || |||||||||| | || | ||
Sbjct 863505 AGTCATATGATTCCAACACCTTAGGAATATCATCACCATGAATACCGACGGCCACTCTCA 863564
Query 117263 TAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCT 117322
||| | || ||| ||| |||| | |||||| | ||| || ||| |
Sbjct 863565 TAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATTAATTCTCAACAGATAAGAACGTT 863624
Query 117323 CCAAGGTCTTGAGACCAAAATAG 117345
|||| ||||||| |||||| |||
Sbjct 863625 CCAAAGTCTTGAAACCAAAGTAG 863647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506969934800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |