Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq12 246 4e-60
seq26 100 4e-16
>seq12
Length=1432871
Score = 246 bits (272), Expect = 4e-60
Identities = 1125/1755 (64%), Gaps = 57/1755 (3%)
Strand=Plus/Minus
Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665
|||| ||||| || | | ||| | || || ||||||| ||||| || |||||| |
Sbjct 863586 GAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTCCT 863527
Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724
|| ||||| |||| ||| |||||| | | || |||| || ||| |||||||
Sbjct 863526 AAGGTGTTGGAATCATATGACTTGATGTCAAAGAGATAC-TTCACACATGCATCACCAAC 863468
Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784
| ||||| |||||||| ||| | || || ||||| || ||| | |||||| ||
Sbjct 863467 GTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCAATGAA 863408
Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844
|| || || || | || || |||| ||| | | | ||||| || || |||
Sbjct 863407 AGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCTAAGAC 863348
Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCG--TATTAGA 111902
||||||||||| || | ||||| || | | | || || || ||| ||||
Sbjct 863347 TGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCC-ACTGGT-TCGTATATTGCC 863290
Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962
||||| |||||| ||| | ||||| ||||| ||| |||| || || ||| || ||
Sbjct 863289 GGTACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACTGCT 863230
Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAG 112016
| ||||| | |||| || || |||| || | || || | || | |||
Sbjct 863229 AGATATGTGGATCAAGGTG---GTAACAAGAGACCAGGTGCCATTGCTATTTACTTGGAG 863173
Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076
|| ||||| || |||||| | || || | || | | || || ||| | ||||||
Sbjct 863172 CCTTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGGTAAAGAGGAG 863113
Query 112077 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135
| |||| || ||| | || | ||||| |||||||||||| | || |||||| | ||
Sbjct 863112 ATTC-GTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGTGT 863054
Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195
||| | | ||| ||| | | || | ||| ||||||| |||||||| ||||
Sbjct 863053 GGAGAGCAACGACAAGTGGACATTGTTCTCTCCTTCTGAGGCACCAGGTCTCTCAGATGT 862994
Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255
||||| ||||| || | ||||| |||||| ||||| | || | |
Sbjct 862993 TTACGGTGACGAGTTCGAGAAATTGTACACTCGTTACGAGAAAGAAGGACGTGGAAGAAG 862934
Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314
|| ||| ||| | || | | ||| | ||| | || |||| || || |||||||
Sbjct 862933 AACAGTGAAGGCT-CAGAAGTTATGGTACCAGATTTTGGAGGCTCAGACAGAAACTGGTA 862875
Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374
|||| | ||| | ||||| || || ||||| |||||||||||| ||||| ||||||
Sbjct 862874 CACCTTTCATGATCTACAAGGATGCTTGTAATAGAAAGAGTAATCAGAAGAACTTGGGTA 862815
Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434
||||| ||| ||| | || || | | || | | ||||||| |
Sbjct 862814 CCATCAAATCTTCGAACTTGTGCTGTGAGGTTGTCGAGTACTCCTCTCCAGATGAGGTTG 862755
Query 112435 CTGTGTGTAACCTCG-CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGAC 112492
|||||||||| | | || || | | | | || | ||| || |||| || | |
Sbjct 862754 GTGTGTGTAACTTGGCCAACATTTG-TTTGCCTGCCTTTGTTGAGTCAGATGAGGA--TC 862698
Query 112493 ATT--TG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545
||| || | | || || | ||| | |||| ||| ||| || ||| |||
Sbjct 862697 ATTGCTGGTTCAACTTCGAGAAGTTGCACAAGATTACTAAAGTTGTTACCCGTAACTTAA 862638
Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGA 112602
|| | |||||||| ||||||| || || || |||| || ||||| || || ||||
Sbjct 862637 ACCGTGTTATTGACAGAAATTACTATCCAGTTCCTGAG---GCCCGTAACTCCAACATGA 862581
Query 112603 GACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGAT---GTATTCATTCTTTGTC 112659
|| || | || |||| ||| ||| |||| ||||| || ||| | ||||| ||| | |
Sbjct 862580 GAAACAGACCTATTGCTCTTGGTATCCAGGGTCTTGCTGATACCTTCTTCATGCTTAGAC 862521
Query 112660 GCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGT 112719
| | ||||| | || || ||| | || | ||||||||||| |||
Sbjct 862520 TAC---CTTTTGACTGTCCAGATGCACGGGAGCTTAACATTCAGATATTTGAGACCTTGT 862464
Query 112720 ATCACGCCGCTCTTGAGGCGAGTTC--GGAGTTGGCAGAGGTTGATGGTCCATATGAAAC 112777
||||||| || | ||| || | | || | || | || || ||| | ||| | ||
Sbjct 862463 ATCACGCTGCATTGGAG--GAATCCAACCAGCTTGCTGTGGAAGAGGGTACTTATCAGAC 862406
Query 112778 CTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGAC 112837
| ||| || |||||||||||| | || | || |||| |||||||||| | || |
Sbjct 862405 ATATGAAGGCTCTCCAGCTTCAAAGGGTATTCTACAATATGATATGTGGAACAAAAAGCC 862346
Query 112838 CAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 112897
| | || | |||||||| |||| |||| || ||| |||||| | ||
Sbjct 862345 TACGGATCTGTGGGACTGGGATACTCTGAAGGCTAAGATTGCCAAGACTGGTCTTAGAAA 862286
Query 112898 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 112957
| ||||||| ||||||| ||||| || || || || | || || ||||| |||| ||
Sbjct 862285 CTCTCTTTTGGTGGCACCTATGCCGACTGCTTCTACTTCCCAGATTATGGGTTATAACGA 862226
Query 112958 ATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGT 113017
||| || ||||| | ||| | |||||||||| ||||||| || || || || ||
Sbjct 862225 ATGTTTCGAACCATTCACCTCTAACATCTATCAGAGAAGAGTTCTTGCTGGTGAATTCCA 862166
Query 113018 GATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT 113075
||| || || | ||| | || || || | || || || | ||| | | |
Sbjct 862165 GATCGTTAATCCTTACATGT--TGAGAGATCTTATTGACATGGGAATATGGAACGATGCA 862108
Query 113076 ATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGAT 113135
|||||| | |||| | | | ||||| ||||| || | | |||| |||
Sbjct 862107 ATGAAGAACTTCATCATTCACGACAACGGTTCTATTCAGAACTTGCCAAACGTTCCCGAT 862048
Query 113136 GAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATG 113195
| || |||||||||||| | ||||||||||| || |||| |||||| | |||
Sbjct 862047 AAGATCAAGAAGTTGTACAGGACAGTTTGGGAGATTTCTCAGAAGTCTGTCATCGTTATG 861988
Query 113196 GCCGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAA 113252
|| || ||| | || ||| | ||| || |||| ||||| ||| ||| || |
Sbjct 861987 GCTGCTGATAG-GGGCGCATACATCTGCCAGTCTCAATCTATGAACATCCATT--TGCAG 861931
Query 113253 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 113312
||||| ||| || | |||| |||||| | || | ||||||||||| | ||
Sbjct 861930 TCACCAACTATGGGTAAATTGACTTCCATGCACTTTTATGGCTGGAAGAAGGGCTTGAAG 861871
Query 113313 ACGGGGATGTATTAC 113327
|| || ||||| |||
Sbjct 861870 ACAGGTATGTACTAC 861856
>seq26
Length=1546578
Score = 100 bits (110), Expect = 4e-16
Identities = 535/840 (64%), Gaps = 31/840 (4%)
Strand=Plus/Plus
Query 112008 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 112067
||||||||||| ||||| |||||||| |||| ||||| || | ||||| ||
Sbjct 306826 TATCTTGAGCCCTGGCATGCGGATATTCTGGAATTCCTCGACCTCAAGAAGAACCACGGC 306885
Query 112068 GATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 112127
| ||||| |||| | |||||||| | || | |||||||| || || ||||||
Sbjct 306886 AAGGAGGAAATGCGGGCAAGGGATCTCTTTTATGCGTTGTGGATTCCGGACCTGTTCATG 306945
Query 112128 AAGAGAGTTGAGGAGAGTGGCAAT-TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCT 112186
| | | | ||| || | | || ||| |||||||| | || | ||||| || ||
Sbjct 306946 AGGCGTG-TGAAGAATGACGAGATGTGGAGTCTCTTTTCTGAGGATACAGCACCAGGACT 307004
Query 112187 CTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG 112246
|| || |||| ||||||||| |||| |||||| ||||||| ||| ||| |
Sbjct 307005 ATCAGACAAATGGGGTCCCGAGTTTGAATCCCTGTACACACAGTACGAAAAAG-AAGGCC 307063
Query 112247 GGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCG 112305
|| || || | | || || | | |||||| | ||||| | ||||| ||||
Sbjct 307064 GGTATCTACGGCAGTTGAAGGCCCGCAAGGTGTGGGAGAGGATTCTTTATTCTCAGACCG 307123
Query 112306 AGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 112365
|||| || || || | | ||||| || || | || || ||| ||||| ||||
Sbjct 307124 AGACAGGAACGCCTTTCCTCCTTTATAAGGATTCGTGCAATGCGAAGTCGAATCAGAAGA 307183
Query 112366 ATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAG 112425
| | || |||||| ||||| ||||| ||| | | || | || ||| |
Sbjct 307184 ACCTTGGAACCATCAAGTCGTCCAATCTCTGCTGCGAAGTTGTCGAGTACTCATCCAAGG 307243
Query 112426 ATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGA 112485
| |||| || ||||| ||||| | || | | | || | || |||||| || ||
Sbjct 307244 ACGAGATCGCCGTGTGCAACCTTGGCTCTGTTGGGTTGCCGATGTTTGTGGA-GGAG-GA 307301
Query 112486 CAAAGAC----ATTTGATTAT-------GAAAAACTCCACGAAGTTACGAAAACTGTCAC 112534
|| ||| | || | | || || |||||| | || |||| | ||
Sbjct 307302 AAACGACGGTACTAGGAGTTTCAACCTGGAGAAGCTCCACCAGGTGGTGAAAGTTCTCGT 307361
Query 112535 AAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG-ACTGCTCGTAAAT 112593
|| ||||| ||| | ||||| ||| | ||||| ||||| | ||| | | |
Sbjct 307362 GAAGAACCTCAACCGGGTTATCGATGTGGGTGCATACCCGCTTGAGCAGTGC-AGAACGT 307420
Query 112594 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG---TATTCA 112650
| |||| ||| || ||||| |||| ||||||| ||||| | || |||| | ||||
Sbjct 307421 CAAATACGAGGCATCGTCCGATTGCAGTCGGTGTTCAAGGATTAGCAGATGCTTTCTTCA 307480
Query 112651 TTCTTTGTCGCCACGCATTTG--ATTCCG-ACGAAGCGAAGGAAATCAATGCGCGTATAT 112707
|| | | | |||||| | |||| || |||| | ||| || || |
Sbjct 307481 GGCTGAGGTGTC---CATTTGGAAGTCCGTACTCCCGGAAGTTGAACAA---GCAAATCT 307534
Query 112708 TTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTC 112767
|| |||| || || || || || |||||| | | ||||||||| || || || |
Sbjct 307535 TTCAGACGATCTACCATGCAGCCCTTGAGCAGTCTGTGGAGTTGGCTCAGAAAGACGGCC 307594
Query 112768 CATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827
||||| || ||||| || || |||| || ||||| || ||||| | |||||||||||
Sbjct 307595 CATATTCGACGTTTGAAGGCTCGCCAGGCTCGCAAGGTGTTCTTCAGTATGATATGTGGG 307654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742167221600
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